RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-233	ENST00000642021	CEP68	Q76N32	757 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ANKRD13B	Q86YJ7	626 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	CARNMT1	Q8N4J0	409 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	TMCO5A	Q8N6Q1	288 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	USP7	Q93009	1102 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	NTMT1	Q9BV86	223 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	MAGEE1	Q9HCI5	957 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	INIP	Q9NRY2	104 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ERVK-18	Q9QC07	812 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	SNX5	Q9Y5X3	404 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	LAMA3	Q16787	3333 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	PER2	O15055	1255 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ALDH4A1	P30038	563 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	FMO3	P31513	532 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	RGS4	P49798	205 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	IL5RA	Q01344	420 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	MAD2L1	Q13257	205 aa	Predicted RBP	13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ARHGEF7	Q14155	803 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	CHST9	Q7L1S5	443 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	GALNT10	Q86SR1	603 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	WFDC5	Q8TCV5	224 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	SLC35B4	Q969S0	331 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	FAM120B	Q96EK7	910 aa	Known RBP	13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	PYURF	Q96I23	114 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	EGLN2	Q96KS0	407 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	TSSK3	Q96PN8	268 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ZNF347	Q96SE7	839 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	SH3GL1	Q99961	368 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ABCG8	Q9H221	673 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	C1orf109	Q9NX04	203 aa		13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	TRNAU1AP	Q9NX07	287 aa	Known RBP	13.5	□□□□□ -0.25
PHGDH-233	ENST00000642021	ZNF99	A8MXY4	864 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	BCKDK	O14874	412 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	SMAD6	O43541	496 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	DIRAS1	O95057	198 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	PDYN	P01213	254 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	EBLN1	P0CF75	366 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	EPB42	P16452	691 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	DGKA	P23743	735 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	RYK	P34925	604 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	IFITM3	Q01628	133 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ADPRM	Q3LIE5	342 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	CPZ	Q66K79	652 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ATG9B	Q674R7	924 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	FBLIM1	Q8WUP2	373 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ULK4	Q96C45	1275 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	CASD1	Q96PB1	797 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	RETREG1	Q9H6L5	497 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	CWH43	Q9H720	699 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	LATS2	Q9NRM7	1088 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	GPRC5B	Q9NZH0	403 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	HECA	Q9UBI9	543 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	PPT2	Q9UMR5	302 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ABCG2	Q9UNQ0	655 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	LRAT	O95237	230 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	PGLS	O95336	258 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	HMGA1	P17096	107 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	RPS3	P23396	243 aa	Known RBP eCLIP	13.49	□□□□□ -0.25	3e-8	■■■■■ 28.4
PHGDH-233	ENST00000642021	EPHA2	P29317	976 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	PRKCZ	Q05513	592 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	GBX1	Q14549	363 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	LRIF1	Q5T3J3	769 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	RBFA	Q8N0V3	343 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ZBTB2	Q8N680	514 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ZFP90	Q8TF47	636 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	MYOC	Q99972	504 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	TRIT1	Q9H3H1	467 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ZFYVE1	Q9HBF4	777 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	TMEM161A	Q9NX61	479 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	VPS51	Q9UID3	782 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	B3GNT3	Q9Y2A9	372 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	FAM220BP	B1ANY3	271 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	TBL1X	O60907	577 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ANGPTL1	O95841	491 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ELN	P15502	786 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	HOXB9	P17482	250 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ACVR2A	P27037	513 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	CLK3	P49761	638 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	DAP	P51397	102 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	RPS14	P62263	151 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	IL1RL1	Q01638	556 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	CHRNA6	Q15825	494 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	SMN1	Q16637	294 aa	Known RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ARMC12	Q5T9G4	340 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	SNX20	Q7Z614	316 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	B3GNT8	Q7Z7M8	397 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	ZDHHC21	Q8IVQ6	265 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	RNF168	Q8IYW5	571 aa	Predicted RBP	13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	FBXO22	Q8NEZ5	403 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	NDNF	Q8TB73	568 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	MCOLN3	Q8TDD5	553 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	MYO19	Q96H55	970 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	KCNH6	Q9H252	994 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	TRPS1	Q9UHF7	1281 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	PCDHGA10	Q9Y5H3	936 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	CPQ	Q9Y646	472 aa		13.49	□□□□□ -0.25
PHGDH-233	ENST00000642021	NUP214	P35658	2090 aa	Predicted RBP	13.48	□□□□□ -0.25
PHGDH-233	ENST00000642021	LAMA2	P24043	3122 aa	Known RBP	13.48	□□□□□ -0.25
PHGDH-233	ENST00000642021	KRT87P	A6NCN2	255 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms