RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LRP8Q14114 963 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 GBX1Q14549 363 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TCEA2Q15560 299 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 SEPT7Q16181 437 aaKnown RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 FAM83EQ2M2I3 478 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TSNAXIP1Q2TAA8 658 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 LRRC8EQ6NSJ5 796 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KLC3Q6P597 504 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 CDHR3Q6ZTQ4 885 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 LCA5Q86VQ0 697 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 VRK3Q8IV63 474 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 SLC22A15Q8IZD6 547 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 MYO1HQ8N1T3 1032 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 SKA2Q8WVK7 121 aaPredicted RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 NXNL1Q96CM4 212 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 UBXN10Q96LJ8 280 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 LRRC61Q9BV99 259 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 STRADBQ9C0K7 418 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 DERL2Q9GZP9 239 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 IQCGQ9H095 443 aaKnown RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TMEM168Q9H0V1 697 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 OSGEPL1Q9H4B0 414 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 CAAP1Q9H8G2 361 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 NMRAL1Q9HBL8 299 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KCNK9Q9NPC2 374 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KLC4Q9NSK0 619 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 ZNF358Q9NW07 568 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 UCKL1Q9NWZ5 548 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TRNAU1APQ9NX07 287 aaKnown RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 APOBEC3BQ9UH17 382 aaKnown RBP9.16□□□□□ -0.94
PHGDH-228ENST00000641847 KLF15Q9UIH9 416 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 CDYLQ9Y232 598 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 PCDHGA7Q9Y5G6 932 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 ENTPD2Q9Y5L3 495 aa9.16□□□□□ -0.94
PHGDH-228ENST00000641847 TMEM120BA0PK00 339 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 BLACEA4D250 179 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 PDZK1P1A8MUH7 402 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 H3BM21 787 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 PRPF4O43172 522 aaKnown RBP eCLIP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 SNX2O60749 519 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 KCNJ13O60928 360 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 PIAS2O75928 621 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 SLCO2B1O94956 709 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 CSF2P04141 144 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 SLC35G4P0C7Q5 338 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 MPC1LP0DKB6 136 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 LIPCP11150 499 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 COL6A2P12110 1019 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 NME1P15531 152 aaKnown RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 JUNDP17535 347 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 TFEBP19484 476 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 NR1D1P20393 614 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 AK4P27144 223 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 OAS2P29728 719 aaKnown RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 PDHA2P29803 388 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 RPA3P35244 121 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 CCT5P48643 541 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 PPP2R2AP63151 447 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 FOXK1P85037 733 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 CTBSQ01459 385 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 PLOD1Q02809 727 aaPredicted RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 ILF3Q12906 894 aaKnown RBP eCLIP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 RPA4Q13156 261 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 SPIDRQ14159 915 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 NR0B2Q15466 257 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 TSNQ15631 228 aaKnown RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 TBR1Q16650 682 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 AGAP9Q5VTM2 703 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 CRYBG3Q68DQ2 2970 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 C16orf46Q6P387 395 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 NEK10Q6ZWH5 1172 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 EFL1Q7Z2Z2 1120 aaKnown RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 ATCAYQ86WG3 371 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 ANKRD42Q8N9B4 389 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 SCYL1Q96KG9 808 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 GPR78Q96P69 363 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 WWP1Q9H0M0 922 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 C12orf65Q9H3J6 166 aaKnown RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 DPEP2Q9H4A9 486 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 SYNDIG1Q9H7V2 258 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 XPR1Q9UBH6 696 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 DCDC2Q9UHG0 476 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 ANAPC2Q9UJX6 822 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 IKZF3Q9UKT9 509 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 ACSL5Q9ULC5 683 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 RUVBL2Q9Y230 463 aaKnown RBP9.15□□□□□ -0.94
PHGDH-228ENST00000641847 FBN2P35556 2912 aa9.15□□□□□ -0.94
PHGDH-228ENST00000641847 CELSR2Q9HCU4 2923 aa9.15□□□□□ -0.95
PHGDH-228ENST00000641847 PRR19A6NJB7 356 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 CDC7O00311 574 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 PLD2O14939 933 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 ZBTB14O43829 449 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 ZWINTO95229 277 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 CELA2BP08218 269 aaPredicted RBP9.14□□□□□ -0.95
PHGDH-228ENST00000641847 CTSEP14091 401 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 IDSP22304 550 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 SLC5A2P31639 672 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 CASRP41180 1078 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 ACTR1BP42025 376 aa9.14□□□□□ -0.95
PHGDH-228ENST00000641847 CLCNKAP51800 687 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms