RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, human

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPT1-215	ENST00000641471	SNRPD1	P62314	119 aa	Known RBP	15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	MPP7	Q5T2T1	576 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	XAF1	Q6GPH4	301 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	C22orf39	Q6P5X5	142 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	SPESP1	Q6UW49	350 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	METTL3	Q86U44	580 aa	Known RBP	15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	ANKRD46	Q86W74	232 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	VRK3	Q8IV63	474 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	HS6ST3	Q8IZP7	471 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	C8orf59	Q8N0T1	100 aa	Predicted RBP	15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	SVOPL	Q8N434	492 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	NETO1	Q8TDF5	533 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	ASIC4	Q96FT7	647 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	TSSK3	Q96PN8	268 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	MCCC1	Q96RQ3	725 aa	Predicted RBP	15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	FANCE	Q9HB96	536 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	AP3M1	Q9Y2T2	418 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	PPIL1	Q9Y3C6	166 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	PCDHGA8	Q9Y5G5	932 aa		15.43	■□□□□ 0.06
PPT1-215	ENST00000641471	PRAMEF4	O60810	478 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	SERPINA1	P01009	418 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	SDC1	P18827	310 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CD247	P20963	164 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CRHBP	P24387	322 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	EEF1B2	P24534	225 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	S100A3	P33764	101 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	ATN1	P54259	1190 aa	Predicted RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	GRSF1	Q12849	480 aa	Known RBP eCLIP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	FGD3	Q5JSP0	725 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	LRRC73	Q5JTD7	316 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	BROX	Q5VW32	411 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	PRAMEF9	Q5VWM5	478 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	TTC23	Q5W5X9	447 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	FAM117B	Q6P1L5	589 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	NEK5	Q6P3R8	708 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	USP45	Q70EL2	814 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	FKBP9P1	Q75LS8	142 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	DET1	Q7L5Y6	550 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	R3HCC1L	Q7Z5L2	792 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	TERB1	Q8NA31	727 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	FAM120B	Q96EK7	910 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	SLC12A9	Q9BXP2	914 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CFHR5	Q9BXR6	569 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	SUV39H2	Q9H5I1	410 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	MAGIX	Q9H6Y5	334 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CIDEB	Q9UHD4	219 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	EIF3F	O00303	357 aa	Predicted RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	TEX28	O15482	410 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	MATN1	P21941	496 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	PRPH2	P23942	346 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	SLC7A9	P82251	487 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	HSPA14	Q0VDF9	509 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	KCNAB2	Q13303	367 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CTU2	Q2VPK5	515 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	RBM48	Q5RL73	367 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	ELMSAN1	Q6PJG2	1045 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	ZNF551	Q7Z340	670 aa	Predicted RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	RBM23	Q86U06	439 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	TMC8	Q8IU68	726 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CHDH	Q8NE62	594 aa	Predicted RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	DNAJB8	Q8NHS0	232 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	GFM2	Q969S9	779 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	PYCR2	Q96C36	320 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	VWCE	Q96DN2	955 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	APIP	Q96GX9	242 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	CNDP2	Q96KP4	475 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	RBM4B	Q9BQ04	359 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	RBM4	Q9BWF3	364 aa	Known RBP	15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	ELOVL6	Q9H5J4	265 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	GPRC5B	Q9NZH0	403 aa		15.42	■□□□□ 0.06
PPT1-215	ENST00000641471	PTPRS	Q13332	1948 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	C16orf96	A6NNT2	1141 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	GNGT2	O14610	69 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	NUAK1	O60285	661 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	FOXD2	O60548	495 aa	Predicted RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	ABCB7	O75027	752 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	SEC14L2	O76054	403 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	PRPS2	P11908	318 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	MYCLP1	P12525	358 aa	Predicted RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	GJA1	P17302	382 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	HLA-F	P30511	346 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	DCT	P40126	519 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	SLC14A1	Q13336	389 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	BOP1	Q14137	746 aa	Known RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	TTC23L	Q6PF05	361 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	KLHL35	Q6PF15	583 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	CHPF	Q8IZ52	775 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	CMTM8	Q8IZV2	173 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	TMEM132C	Q8N3T6	1108 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	ZCCHC7	Q8N3Z6	543 aa	Known RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	BEND7	Q8N7W2	519 aa	Predicted RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	L3MBTL4	Q8NA19	623 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	OR5K1	Q8NHB7	308 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	SNX19	Q92543	992 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	MRPS31	Q92665	395 aa	Known RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	HDAC2	Q92769	488 aa	Known RBP	15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	ITCH	Q96J02	903 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	CAPNS2	Q96L46	248 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	HHIP	Q96QV1	700 aa		15.41	■□□□□ 0.06
PPT1-215	ENST00000641471	ZDHHC6	Q9H6R6	413 aa		15.41	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms