RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 TRIT1Q9H3H1 467 aaKnown RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 TUBB1Q9H4B7 451 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 MVB12BQ9H7P6 319 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 BRF2Q9HAW0 419 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 CCDC177Q9NQR7 707 aaPredicted RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 WNT16Q9UBV4 365 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 SERGEFQ9UGK8 458 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ADGRE2Q9UHX3 823 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ZNF225Q9UK10 706 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 PPT2Q9UMR5 302 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ASF1AQ9Y294 204 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 AP3M1Q9Y2T2 418 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 TSC22D4Q9Y3Q8 395 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 TIMM22Q9Y584 194 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 ATG2BQ96BY7 2078 aa9.46□□□□□ -0.9
PHGDH-215ENST00000641371 C15orf38-AP3S2A0A0A6YYH1 394 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 LOC100653049A0A140TA62 436 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 TMEM202A6NGA9 273 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 H0YIV9 168 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 MANBAO00462 879 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 DLL1O00548 723 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PPP6CO00743 305 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 LSM1O15116 133 aaKnown RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ANGPT2O15123 496 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 LATO43561 262 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 NRP2O60462 931 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PRMT3O60678 531 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 KRT34O76011 436 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 SEMA4FO95754 770 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ERGP11308 486 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 NDUFV2P19404 249 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 IDSP22304 550 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 GPX3P22352 226 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 CXCR2P25025 360 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 IMPA1P29218 277 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PRDX3P30048 256 aaKnown RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 IGFALSP35858 605 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 HALP42357 657 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 RABIFP47224 123 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PREPP48147 710 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 NUDT2P50583 147 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 TPMTP51580 245 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 KCNK10P57789 538 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PFN3P60673 137 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PRKG2Q13237 762 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 NAE1Q13564 534 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 NFATC4Q14934 902 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 C6orf136Q5SQH8 315 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 FRG2Q64ET8 278 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 TMEM198Q66K66 360 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 LCTLQ6UWM7 567 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 WASH2PQ6VEQ5 465 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 BNC2Q6ZN30 1099 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ARPINQ7Z6K5 226 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 TRIM74Q86UV6 250 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ZFAND4Q86XD8 727 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 DCP2Q8IU60 420 aaKnown RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 SYTL1Q8IYJ3 562 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ULK2Q8IYT8 1036 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 FAM13CQ8NE31 585 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 OR5K2Q8NHB8 316 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 SELENOMQ8WWX9 145 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 TFGQ92734 400 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 STMN2Q93045 179 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ESAMQ96AP7 390 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 C3orf30Q96M34 536 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 WDR92Q96MX6 357 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 FRG2BQ96QU4 278 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 KCNA7Q96RP8 456 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 PKP4Q99569 1192 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 THTPAQ9BU02 230 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 SGPP1Q9BX95 441 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 OSBPL6Q9BZF3 934 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ZDHHC5Q9C0B5 715 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 LRTM1Q9HBL6 345 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 WASH6PQ9NQA3 447 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 C1orf109Q9NX04 203 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 GULP1Q9UBP9 304 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 KLQ9UEF7 1012 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ZNHIT2Q9UHR6 403 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 MBD1Q9UIS9 605 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ZNF490Q9ULM2 529 aaPredicted RBP9.45□□□□□ -0.9
PHGDH-215ENST00000641371 SLC22A14Q9Y267 594 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 BTRCQ9Y297 605 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 ASB1Q9Y576 335 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 GPR45Q9Y5Y3 372 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
PHGDH-215ENST00000641371 LAMA3Q16787 3333 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 KCNE1BA0A087WTH5 132 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 ATP6AP2A0A1C7CYW4 349 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 KANSL1LA0AUZ9 987 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 FAM234BA2RU67 622 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 PRAMEF26H0Y7S4 382 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 AIM2O14862 343 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DNAJA2O60884 412 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 PEX11AO75192 247 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 FKBP6O75344 327 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 SLC22A3O75751 556 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms