RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 UGT3A1Q6NUS8 523 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 RNF31Q96EP0 1072 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 PKP4Q99569 1192 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 ADAMTS6Q9UKP5 1117 aa25.79■■□□□ 1.72
VEGFA-231ENST00000640499 A0A1W2PPV9 198 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 EIF3FO00303 357 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-231ENST00000640499 POLR1CO15160 346 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-231ENST00000640499 ERGP11308 486 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 FGF5P12034 268 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 ZNF28P17035 718 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 TAS2R39P59534 338 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 KIR2DS3Q14952 304 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 CYP2A13Q16696 494 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 FAM45BPQ6NSW5 357 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 TAX1BP1Q86VP1 789 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 RELL1Q8IUW5 271 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 FBXO15Q8NCQ5 510 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-231ENST00000640499 OR9A1PQ8NGU1 263 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 HMGCLL1Q8TB92 370 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 FAM45AQ8TCE6 357 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 FBF1Q8TES7 1133 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 HNRNPLLQ8WVV9 542 aaKnown RBP25.78■■□□□ 1.72
VEGFA-231ENST00000640499 KCNE4Q8WWG9 221 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 ASPSCR1Q9BZE9 553 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 RHOJQ9H4E5 214 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 IKZF3Q9UKT9 509 aa25.78■■□□□ 1.72
VEGFA-231ENST00000640499 HCRTR1O43613 425 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 KDM1AO60341 852 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 TIAF1O95411 115 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 TLE3Q04726 772 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 SRSF6Q13247 344 aaKnown RBP25.77■■□□□ 1.72
VEGFA-231ENST00000640499 IL11RAQ14626 422 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 GPR19Q15760 415 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 KBTBD12Q3ZCT8 623 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 TTC23LQ6PF05 361 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 CEACAM20Q6UY09 585 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 TIPARPQ7Z3E1 657 aaKnown RBP25.77■■□□□ 1.72
VEGFA-231ENST00000640499 CEP97Q8IW35 865 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 VPS39Q96JC1 886 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 ELMO2Q96JJ3 720 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 FAM129AQ9BZQ8 928 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 FAM60AQ9NP50 221 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 NINJ2Q9NZG7 142 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 SLC39A10Q9ULF5 831 aa25.77■■□□□ 1.72
VEGFA-231ENST00000640499 MTO1Q9Y2Z2 717 aaKnown RBP25.77■■□□□ 1.72
VEGFA-231ENST00000640499 FAM95CA0A1B0GW59 222 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 ISM1B1AKI9 464 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 RRP8O43159 456 aaKnown RBP25.76■■□□□ 1.71
VEGFA-231ENST00000640499 FAM155BO75949 473 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 ZNF460Q14592 562 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 EFTUD2Q15029 972 aaKnown RBP eCLIP25.76■■□□□ 1.714e-10■■■■■ 38.6
VEGFA-231ENST00000640499 SLC5A12Q1EHB4 618 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 MAGEC3Q8TD91 643 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 ZNF501Q96CX3 271 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-231ENST00000640499 LINGO1Q96FE5 620 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 CRELD1Q96HD1 420 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 TEFMQ96QE5 360 aaKnown RBP25.76■■□□□ 1.71
VEGFA-231ENST00000640499 DPH1Q9BZG8 443 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 FGF21Q9NSA1 209 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 NSMCE4AQ9NXX6 385 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 SPATA7Q9P0W8 599 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 PILRAQ9UKJ1 303 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 KLHL20Q9Y2M5 609 aa25.76■■□□□ 1.71
VEGFA-231ENST00000640499 KLK10O43240 276 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 EFSO43281 561 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 ZNF500O60304 480 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-231ENST00000640499 WISP3O95389 354 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-231ENST00000640499 CATP04040 527 aaKnown RBP25.75■■□□□ 1.71
VEGFA-231ENST00000640499 RHOXF2BP0C7M4 288 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 LIPCP11150 499 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 CD82P27701 267 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 GABRA4P48169 554 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 YBX1P67809 324 aaKnown RBP25.75■■□□□ 1.71
VEGFA-231ENST00000640499 TUBB3Q13509 450 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 C19orf48Q6RUI8 117 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 RHOXF2Q9BQY4 288 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 ZPBPQ9BS86 351 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 TMEM184BQ9Y519 407 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-231ENST00000640499 SPTBP11277 2137 aa25.75■■□□□ 1.71
VEGFA-231ENST00000640499 A0A0J9YY10 115 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 DLGAP3O95886 979 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 SAT1P21673 171 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 PSMB5P28074 263 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 ARL4DP49703 201 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 CDHR3Q6ZTQ4 885 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 UBE2R2Q712K3 238 aaPredicted RBP25.74■■□□□ 1.71
VEGFA-231ENST00000640499 LRRC56Q8IYG6 542 aaPredicted RBP25.74■■□□□ 1.71
VEGFA-231ENST00000640499 PPM1NQ8N819 430 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 OR2A1Q8NGT9 310 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 CDKL2Q92772 493 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 NKD1Q969G9 470 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 FMO2Q99518 471 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 RBBP8Q99708 897 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 CPNE1Q99829 537 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 RAB11FIP5Q9BXF6 653 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 SOHLH2Q9NX45 425 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 MTRF1LQ9UGC7 380 aaKnown RBP25.74■■□□□ 1.71
VEGFA-231ENST00000640499 PDE10AQ9Y233 779 aa25.74■■□□□ 1.71
VEGFA-231ENST00000640499 ITPR1Q14643 2758 aa25.73■■□□□ 1.71
VEGFA-231ENST00000640499 TEX51A0A1B0GUA7 166 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms