RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 HALP42357 657 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 ARL14EPQ8N8R7 260 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 PCSK9Q8NBP7 692 aaKnown RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 OR7A2PQ8NGA2 310 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 RHBDF1Q96CC6 855 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 DOK1Q99704 481 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 ACPTQ9BZG2 426 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 TRIM64A6NGJ6 449 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 CBFA2T3O75081 653 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 NDUFS2O75306 463 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 SEC24AO95486 1093 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 PAX3P23760 479 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 HNF1BP35680 557 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 PPP2R2BQ00005 443 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 DNASE1L3Q13609 305 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 SPATS1Q496A3 300 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF540Q8NDQ6 660 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 NDNFQ8TB73 568 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 AUTS2Q8WXX7 1259 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 RORBQ92753 470 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 ZNF451Q9Y4E5 1061 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 FNDC1Q4ZHG4 1894 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 DYTNA2CJ06 578 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 NADKO95544 446 aaPredicted RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 IL6P05231 212 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 BPIP17213 487 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 CAP1Q01518 475 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 RBM48Q5RL73 367 aaKnown RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 TXNDC8Q6A555 127 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 CEP68Q76N32 757 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 DCP2Q8IU60 420 aaKnown RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 HS6ST3Q8IZP7 471 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 HDAC2Q92769 488 aaKnown RBP14.25□□□□□ -0.13
SCARB2-221ENST00000640341 PANX1Q96RD7 426 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 LHX3Q9UBR4 397 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 PCDHB1Q9Y5F3 818 aa14.25□□□□□ -0.13
SCARB2-221ENST00000640341 SLC28A1O00337 649 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 KRT6AP02538 564 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 KRT6BP04259 564 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ABCB1P08183 1280 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 MAGP20916 626 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 GSTM2P28161 218 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 RXRGP48443 463 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 KRT6CP48668 564 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 EMX1Q04741 257 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 MRPL58Q14197 206 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ADCK1Q86TW2 530 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 TMEM132CQ8N3T6 1108 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 MTERF1Q99551 399 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 SH3GL1Q99961 368 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 YTHDF1Q9BYJ9 559 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 EPS8L2Q9H6S3 715 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 KAT8Q9H7Z6 458 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 TMEM161AQ9NX61 479 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 PRRG1O14668 218 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 CLDN9O95484 217 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 GALTP07902 379 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 COL6A1P12109 1028 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 CDH3P22223 829 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ALDH7A1P49419 539 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 KIAA0040Q15053 153 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 CARD16Q5EG05 197 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 HORMAD1Q86X24 394 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 APIPQ96GX9 242 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 GORASP2Q9H8Y8 452 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 STARD7Q9NQZ5 370 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 PDP1Q9P0J1 537 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 SLC22A14Q9Y267 594 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 TMEM189-UBE2V1I3L0A0 370 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ANXA5P08758 320 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ZDHHC11BP0C7U3 371 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ARHGDIAP52565 204 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 GP2P55259 537 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ISL1P61371 349 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 NCS1P62166 190 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 RELAQ04206 551 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 MAD2L1Q13257 205 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 RUNDC3AQ59EK9 446 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 UBE2R2Q712K3 238 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 CYP4Z1Q86W10 505 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 RNF168Q8IYW5 571 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 OR5K1Q8NHB7 308 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 ZFP90Q8TF47 636 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 MYLIPQ8WY64 445 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 SCLYQ96I15 445 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 SPATA17Q96L03 361 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 TUBA1CQ9BQE3 449 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 DCAF13Q9NV06 445 aaKnown RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 TMEM9Q9P0T7 183 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 MBD1Q9UIS9 605 aaPredicted RBP14.24□□□□□ -0.13
SCARB2-221ENST00000640341 CCL27Q9Y4X3 112 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 OARD1Q9Y530 152 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 GMPPBQ9Y5P6 360 aa14.24□□□□□ -0.13
SCARB2-221ENST00000640341 PGLSO95336 258 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 STK19P49842 368 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-221ENST00000640341 NPTX1Q15818 432 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 LAIR2Q6ISS4 152 aa14.23□□□□□ -0.13
SCARB2-221ENST00000640341 TMCO2Q7Z6W1 182 aaPredicted RBP14.23□□□□□ -0.13
SCARB2-221ENST00000640341 DEFB128Q7Z7B8 93 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms