RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 RFPL1O75677 317 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 GUCA1CO95843 209 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 SLC16A8O95907 504 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 LTA4HP09960 611 aaKnown RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ERGP11308 486 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 UGT2B7P16662 529 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TFEBP19484 476 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 PSMB5P28074 263 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 IMPA1P29218 277 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 PRDX3P30048 256 aaKnown RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 CCKBRP32239 447 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 GLRBP48167 497 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 LSSP48449 732 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 SEPHS1P49903 392 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 IFFO1Q0D2I5 559 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 C16orf72Q14CZ0 275 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 OR4D1Q15615 310 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 CYP2A13Q16696 494 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TAF1BQ53T94 588 aaPredicted RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 SUSD1Q6UWL2 747 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TIFABQ6ZNK6 161 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ARHGAP22Q7Z5H3 698 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TRIM73Q86UV7 250 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TDRPQ86YL5 185 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 FAM20CQ8IXL6 584 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 PLD6Q8N2A8 252 aaKnown RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 FLVCR1-AS1Q8TAF5 88 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ZNF480Q8WV37 535 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ANKRD7Q92527 254 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ZBTB9Q96C00 473 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ZDHHC12Q96GR4 267 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TMEM74Q96NL1 305 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 OR2A14Q96R47 310 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 RAB11FIP5Q9BXF6 653 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 TWSG1Q9GZX9 223 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 ZNF358Q9NW07 568 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 STOX2Q9P2F5 926 aaPredicted RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 PDP2Q9P2J9 529 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 LNPEPQ9UIQ6 1025 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 POMT2Q9UKY4 750 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 DCHS1Q96JQ0 3298 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 RP1P56715 2156 aa12.77□□□□□ -0.37
GTF3A-209ENST00000640289 GOLGA4Q13439 2230 aaKnown RBP12.77□□□□□ -0.37
GTF3A-209ENST00000640289 A0A1W2PNU3 283 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 A0A1W2PPM1 405 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 A0A1W2PPV9 198 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 NCF1BA6NI72 391 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 NCF1CA8MVU1 366 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 C2orf74A8MZ97 194 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 E7ENX8 843 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 RASSF9O75901 435 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 KLHL2O95198 593 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 MPOP05164 745 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ENO2P09104 434 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 HIST1H2AGP0C0S8 130 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 NCF1P14598 390 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 HIST1H2ADP20671 130 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 SLC26A3P40879 764 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 KCNC1P48547 511 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 PNLIPRP1P54315 467 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ATP6V0D1P61421 351 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 TAP2Q03519 686 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 TSTA3Q13630 321 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ZXDCQ2QGD7 858 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 BEND6Q5SZJ8 279 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 CACHD1Q5VU97 1274 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ANKS6Q68DC2 871 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 SPESP1Q6UW49 350 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ADAMTSL2Q86TH1 951 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ISCA2Q86U28 154 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 LRRC56Q8IYG6 542 aaPredicted RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 SYTL1Q8IYJ3 562 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 RAB42Q8N4Z0 105 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 HMGCLL1Q8TB92 370 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 EXT2Q93063 718 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 MTBPQ96DY7 904 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 HIST1H2AHQ96KK5 128 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 CCDC138Q96M89 665 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 HIST1H2AJQ99878 128 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 H2AFJQ9BTM1 129 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 KLHL25Q9H0H3 589 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ATG10Q9H0Y0 220 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ALG9Q9H6U8 611 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 PPCSQ9HAB8 311 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 NMRAL1Q9HBL8 299 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ABCF3Q9NUQ8 709 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 PCMTD2Q9NV79 361 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 ARL15Q9NXU5 204 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 NOVA2Q9UNW9 492 aaKnown RBP12.76□□□□□ -0.37
GTF3A-209ENST00000640289 OARD1Q9Y530 152 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 SPEGQ15772 3267 aa12.76□□□□□ -0.37
GTF3A-209ENST00000640289 IGHV5-51A0A0C4DH38 117 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 PABPN1LA6NDY0 278 aaKnown RBP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 TLCD2A6NGC4 264 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 GOLGA8RI6L899 631 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 MATN2O00339 956 aa12.75□□□□□ -0.37
GTF3A-209ENST00000640289 PRICKLE3O43900 615 aaPredicted RBP12.75□□□□□ -0.37
GTF3A-209ENST00000640289 CDH16O75309 829 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms