RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 OR52E6Q96RD3 313 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 RWDD3Q9Y3V2 267 aa20.95■□□□□ 0.94
CLN6-224ENST00000638076 RNF103-CHMP3A0A140T963 221 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 MT-ND1P03886 318 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 HALP42357 657 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 SYTL3Q4VX76 610 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 LDLRAP1Q5SW96 308 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 ERAP2Q6P179 960 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 DNAJC14Q6Y2X3 702 aaPredicted RBP20.94■□□□□ 0.94
CLN6-224ENST00000638076 HCAR2Q8TDS4 363 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 OSCP1Q8WVF1 389 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 AP2M1Q96CW1 435 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 THUMPD3Q9BV44 507 aaKnown RBP20.94■□□□□ 0.94
CLN6-224ENST00000638076 TMEM106CQ9BVX2 250 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 QSOX1O00391 747 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 KPNA3O00505 521 aaPredicted RBP20.94■□□□□ 0.94
CLN6-224ENST00000638076 GSTM1P09488 218 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 MYOGP15173 224 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 ATP6V1B1P15313 513 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 VIPR2P41587 438 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 VASPP50552 380 aaPredicted RBP20.94■□□□□ 0.94
CLN6-224ENST00000638076 GSTM4Q03013 218 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 MESP2Q0VG99 397 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 CHIT1Q13231 466 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 ATP6AP1Q15904 470 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 RASGRP3Q8IV61 690 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 PHOSPHO2Q8TCD6 241 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 HERVK_113Q902F9 699 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 FBXL8Q96CD0 374 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 RNF145Q96MT1 663 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 VPS35Q96QK1 796 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 WRAP53Q9BUR4 548 aaKnown RBP20.94■□□□□ 0.94
CLN6-224ENST00000638076 MRPS26Q9BYN8 205 aaKnown RBP20.94■□□□□ 0.94
CLN6-224ENST00000638076 IKZF5Q9H5V7 419 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 SLC25A37Q9NYZ2 338 aa20.94■□□□□ 0.94
CLN6-224ENST00000638076 ENO4A6NNW6 628 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 ARHGEF33A8MVX0 844 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 C5orf67F2Z3F1 127 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 AREL1O15033 823 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 TULP3O75386 442 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 TFAP2AP05549 437 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 GGT1P19440 569 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 MAP4P27816 1152 aaKnown RBP20.93■□□□□ 0.94
CLN6-224ENST00000638076 PREPP48147 710 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 CYP4F3Q08477 520 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.93■□□□□ 0.94
CLN6-224ENST00000638076 KRT80Q6KB66 452 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 MSRB3Q8IXL7 192 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 LILRA3Q8N6C8 439 aaPredicted RBP20.93■□□□□ 0.94
CLN6-224ENST00000638076 MFSD2AQ8NA29 543 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 OR10A6Q8NH74 314 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 WFIKKN2Q8TEU8 576 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 TFAP2CQ92754 450 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 TMEM159Q96B96 161 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 CHID1Q9BWS9 393 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 ANKRD60Q9BZ19 345 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 PLOD2O00469 737 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 DLGAP1O14490 977 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 ACOX3O15254 700 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 ATG13O75143 517 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 PSIP1O75475 530 aaKnown RBP20.93■□□□□ 0.94
CLN6-224ENST00000638076 ADH1CP00326 375 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 PRPH2P23942 346 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 RPL5P46777 297 aaKnown RBP20.93■□□□□ 0.94
CLN6-224ENST00000638076 METAP1P53582 386 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 CLDN8P56748 225 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 TMEM115Q12893 351 aaPredicted RBP20.93■□□□□ 0.94
CLN6-224ENST00000638076 TMTC4Q5T4D3 741 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 FRG2Q64ET8 278 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 CYP2U1Q7Z449 544 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 OR2T12Q8NG77 320 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 FOXJ1Q92949 421 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 CMTM7Q96FZ5 175 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 APIPQ96GX9 242 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 TSSK3Q96PN8 268 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 FRG2BQ96QU4 278 aa20.93■□□□□ 0.94
CLN6-224ENST00000638076 WNT9AO14904 365 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 CLGNO14967 610 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 HOXC11O43248 304 aaPredicted RBP20.92■□□□□ 0.94
CLN6-224ENST00000638076 ANXA6P08133 673 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 PRPS2P11908 318 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 CDH1P12830 882 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 TACR1P25103 407 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 PHC1P78364 1004 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 CNPY1Q3B7I2 92 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 GTDC1Q4AE62 458 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 SPRED1Q7Z699 444 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 C12orf76Q8N812 135 aaPredicted RBP20.92■□□□□ 0.94
CLN6-224ENST00000638076 NXPE3Q969Y0 559 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 FAM83CQ9BQN1 747 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 PRRT4C9JH25 899 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 GMNNO75496 209 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 JUPP14923 745 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 NELFEP18615 380 aaKnown RBP20.92■□□□□ 0.94
CLN6-224ENST00000638076 PRLHRP49683 370 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 POLE2P56282 527 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 KCNC3Q14003 757 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 RNF175Q8N4F7 328 aa20.92■□□□□ 0.94
CLN6-224ENST00000638076 SMG7Q92540 1137 aaKnown RBP20.92■□□□□ 0.94
CLN6-224ENST00000638076 FIG4Q92562 907 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms