RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 LINGO1Q96FE5 620 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 ATXN7L3BQ96GX2 97 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 APOPT1Q96IL0 206 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 HIST1H2AHQ96KK5 128 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 RMDN2Q96LZ7 410 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 C12orf66Q96MD2 445 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SMC6Q96SB8 1091 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 HIST1H2AJQ99878 128 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 MRPL57Q9BQC6 102 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 H2AFJQ9BTM1 129 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 GTPBP2Q9BX10 602 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 SLC12A9Q9BXP2 914 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TWSG1Q9GZX9 223 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 RAB33BQ9H082 229 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 IQCGQ9H095 443 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 WWP1Q9H0M0 922 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 MRPL46Q9H2W6 279 aaKnown RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 PARVBQ9HBI1 364 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TMBIM4Q9HC24 238 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 OR6C2Q9NZP2 312 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 CTNNAL1Q9UBT7 734 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 TBC1D29Q9UFV1 150 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 ASF1AQ9Y294 204 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 DNAJC16Q9Y2G8 782 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 OARD1Q9Y530 152 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 PCYT1BQ9Y5K3 369 aaPredicted RBP6.54□□□□□ -1.36
UPF3B-205ENST00000636792 ENTPD2Q9Y5L3 495 aa6.54□□□□□ -1.36
UPF3B-205ENST00000636792 A0A0C4DFX4 3053 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 BPTFQ12830 3046 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ASCC3Q8N3C0 2202 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TLDC2A0PJX2 215 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 H3BQF6 201 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 BTN3A1O00481 513 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 COPEO14579 308 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PRPF4O43172 522 aaKnown RBP eCLIP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 NOBOXO60393 691 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 C1orf105O95561 183 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 VIPP01282 170 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ANXA5P08758 320 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CD1DP15813 335 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 KRT4P19013 534 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TAC1P20366 129 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CSRP1P21291 193 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ACP1P24666 158 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 AK4P27144 223 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CRHR1P34998 444 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLCO1A2P46721 670 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PREPP48147 710 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PIK3CGP48736 1102 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 RAB28P51157 221 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PRKAA2P54646 552 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ASPHQ12797 758 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 BIRC2Q13490 618 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SQSTM1Q13501 440 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SF3A2Q15428 464 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 NR0B2Q15466 257 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SMAD1Q15797 465 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 RPE65Q16518 533 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PPP1R3AQ16821 1122 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 DEFB133Q30KQ1 61 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 HSP90B2PQ58FF3 399 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ACSBG2Q5FVE4 666 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TECRLQ5HYJ1 363 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ANKS6Q68DC2 871 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 KCTD16Q68DU8 428 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SBSNQ6UWP8 590 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CYHR1Q6ZMK1 362 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 LRRC69Q6ZNQ3 347 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 FAM83HQ6ZRV2 1179 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SH2D5Q6ZV89 423 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CMC1Q7Z7K0 106 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PIM3Q86V86 326 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLC22A9Q8IVM8 553 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 NAXDQ8IW45 347 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 KLHDC8AQ8IYD2 350 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 KIRREL3Q8IZU9 778 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLC25A45Q8N413 288 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CHCHD4Q8N4Q1 142 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PDPRQ8NCN5 879 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 FAM46DQ8NEK8 389 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 OR2W6PQ8NHA6 318 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CCL4L1Q8NHW4 92 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLC37A2Q8TED4 501 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 UBTD2Q8WUN7 234 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 EEF1AKMT1Q8WVE0 214 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SKA2Q8WVK7 121 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SREK1Q8WXA9 508 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TLCD1Q96CP7 247 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CCDC138Q96M89 665 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 ATOH8Q96SQ7 321 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CD180Q99467 661 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLC30A3Q99726 388 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PCBD2Q9H0N5 130 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 VPS11Q9H270 941 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 TCEAL2Q9H3H9 227 aaPredicted RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLC32A1Q9H598 525 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CNOT10Q9H9A5 744 aaKnown RBP6.53□□□□□ -1.36
UPF3B-205ENST00000636792 CAB39LQ9H9S4 337 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 PRM3Q9NNZ6 103 aa6.53□□□□□ -1.36
UPF3B-205ENST00000636792 SLC40A1Q9NP59 571 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms