RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CYP4Z1Q86W10 505 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 MICU2Q8IYU8 434 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ARL10Q8N8L6 244 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 ZNF420Q8TAQ5 688 aaPredicted RBP13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 MCOLN3Q8TDD5 553 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 COX4I2Q96KJ9 171 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 MUC13Q9H3R2 512 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 CDH7Q9ULB5 785 aa13.7□□□□□ -0.22
CACNA1A-228ENST00000636610 GLYATL1P3A0A0U1RQE8 302 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 H0YAE9 185 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 BCKDKO14874 412 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 SEC14L2O76054 403 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ABCB1P08183 1280 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 JAK1P23458 1154 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CTSOP43234 321 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 PPP2R2BQ00005 443 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ZXDCQ2QGD7 858 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 PAGE2BQ5JRK9 111 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 LAIR1Q6GTX8 287 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ADNP2Q6IQ32 1131 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 RGMBQ6NW40 437 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 SLCO6A1Q86UG4 719 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 VRK3Q8IV63 474 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ZDHHC21Q8IVQ6 265 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 SLC22A14Q9Y267 594 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 MYOFQ9NZM1 2061 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 FUOMA2VDF0 154 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CLPXO76031 633 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 WDR47O94967 919 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ANGPTL1O95841 491 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 COL6A1P12109 1028 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 TNFRSF1BP20333 461 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ITGALP20701 1170 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 HALP42357 657 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 BCL2L1Q07817 233 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CCSAPQ6IQ19 270 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 TRAF7Q6Q0C0 670 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 SERPINA13PQ6UXR4 307 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 DCP2Q8IU60 420 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 HS6ST3Q8IZP7 471 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 GOLM1Q8NBJ4 401 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 GPR26Q8NDV2 337 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ZFP90Q8TF47 636 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 PIH1D2Q8WWB5 315 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 MAL2Q969L2 176 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 KAT8Q9H7Z6 458 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 STARD7Q9NQZ5 370 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 TMEM161AQ9NX61 479 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 DAPK2Q9UIK4 370 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ABT1Q9ULW3 272 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 GMEB1Q9Y692 573 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 VCANP13611 3396 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ARNTLO00327 626 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 ZSCAN9O15535 394 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 DGKAP23743 735 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 TTKP33981 857 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 MAGEA10P43363 369 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CLCN4P51793 760 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 GP2P55259 537 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 NCS1P62166 190 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 RPS14P62263 151 aaKnown RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 EMX1Q04741 257 aaPredicted RBP13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CBX3Q13185 183 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 RNF180Q86T96 592 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CLECL1Q8IZS7 167 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 RBFAQ8N0V3 343 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 DOK1Q99704 481 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 MIR1-1HGQ9H1L0 117 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 C1orf109Q9NX04 203 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 GNPTGQ9UJJ9 305 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 PPT2Q9UMR5 302 aa13.69□□□□□ -0.22
CACNA1A-228ENST00000636610 CHD5Q8TDI0 1954 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 NPIPB15A6NHN6 443 aaPredicted RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 RFXANKO14593 260 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 PRRG1O14668 218 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 CPNE6O95741 557 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 GBAP04062 536 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 HMGA1P17096 107 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 IGFBP5P24593 272 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 ISL1P61371 349 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 MOGQ16653 247 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 SYT16Q17RD7 645 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 TRIM16LQ309B1 348 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 PCSK9Q8NBP7 692 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 OR8J3Q8NGG0 315 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 RBM4BQ9BQ04 359 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 RBM4Q9BWF3 364 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 ORC6Q9Y5N6 252 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 M0R129 80 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 PGLSO95336 258 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 IGHA2P01877 340 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 INHBBP09529 407 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 NUDT7P0C024 238 aa13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 ALDH7A1P49419 539 aaKnown RBP13.68□□□□□ -0.22
CACNA1A-228ENST00000636610 ATN1P54259 1190 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms