RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 AGAP11Q8TF27 550 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 NINJ1Q92982 152 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 VKORC1Q9BQB6 163 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 IL1RAPL1Q9NZN1 696 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 C3orf18Q9UK00 162 aa17.34■□□□□ 0.37
CLN6-212ENST00000636020 A0A1W2PQ72 361 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 EPOP01588 193 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 CELA2AP08217 269 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 CDK11BP21127 795 aaKnown RBP17.33■□□□□ 0.36
CLN6-212ENST00000636020 MCM3P25205 808 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 GJC1P36383 396 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 FOLH1Q04609 750 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 YOD1Q5VVQ6 348 aaPredicted RBP17.33■□□□□ 0.36
CLN6-212ENST00000636020 KDELC1Q6UW63 502 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 NLRP9Q7RTR0 991 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 DOLPP1Q86YN1 238 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 MAP7D3Q8IWC1 876 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 SLC25A41Q8N5S1 370 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 BLOC1S5Q8TDH9 187 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 DCUN1D1Q96GG9 259 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 ZNF559Q9BR84 538 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 REPIN1Q9BWE0 567 aaKnown RBP17.33■□□□□ 0.36
CLN6-212ENST00000636020 ASB8Q9H765 288 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 NPDC1Q9NQX5 325 aaPredicted RBP17.33■□□□□ 0.36
CLN6-212ENST00000636020 ENAMQ9NRM1 1142 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 OR6C2Q9NZP2 312 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 ANAPC7Q9UJX3 599 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 HCFC1P51610 2035 aa17.33■□□□□ 0.36
CLN6-212ENST00000636020 FAM227AF5H4B4 570 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 STX7O15400 261 aaKnown RBP17.32■□□□□ 0.36
CLN6-212ENST00000636020 ZGLP1P0C6A0 271 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 TPBGLP0DKB5 382 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 PEBP1P30086 187 aaKnown RBP17.32■□□□□ 0.36
CLN6-212ENST00000636020 RAB28P51157 221 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 WNT3AP56704 352 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 RPA4Q13156 261 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 GRM7Q14831 915 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 TFDP3Q5H9I0 405 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 ZNF766Q5HY98 468 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 CNSTQ6PJW8 725 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 RIPOR1Q6ZS17 1223 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 TAOK1Q7L7X3 1001 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 DMRTC2Q8IXT2 367 aaPredicted RBP17.32■□□□□ 0.36
CLN6-212ENST00000636020 PRSS58Q8IYP2 241 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 DTWD1Q8N5C7 304 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 METTL27Q8N6F8 245 aaPredicted RBP17.32■□□□□ 0.36
CLN6-212ENST00000636020 PLD5Q8N7P1 536 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 OR5AR1Q8NGP9 310 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 COQ3Q9NZJ6 369 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 LIMA1Q9UHB6 759 aaKnown RBP17.32■□□□□ 0.36
CLN6-212ENST00000636020 FAM153AQ9UHL3 310 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 KLHL20Q9Y2M5 609 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 HEY1Q9Y5J3 304 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 MAU2Q9Y6X3 613 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 RTTNQ86VV8 2226 aa17.32■□□□□ 0.36
CLN6-212ENST00000636020 A0A0A6YYK5 440 aaPredicted RBP17.31■□□□□ 0.36
CLN6-212ENST00000636020 AGAP14A8MT82 685 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 SRP72O76094 671 aaKnown RBP17.31■□□□□ 0.36
CLN6-212ENST00000636020 SLCO2B1O94956 709 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 MLYCDO95822 493 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 UQCRHP07919 91 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 ITGAMP11215 1152 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 RALBP11234 206 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 MAGP20916 626 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 UBE2HP62256 183 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 OCA2Q04671 838 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 OLIG2Q13516 323 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 PCOLCEQ15113 449 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 TEX44Q53QW1 395 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 ABHD17BQ5VST6 288 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 CES4AQ5XG92 561 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 C3P1Q6ZMU1 363 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 CPNE8Q86YQ8 564 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 MIEF2Q96C03 454 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 RNF157Q96PX1 679 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 TSPAN10Q9H1Z9 355 aaPredicted RBP17.31■□□□□ 0.36
CLN6-212ENST00000636020 STMN3Q9NZ72 180 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 KCNN3Q9UGI6 736 aa17.31■□□□□ 0.36
CLN6-212ENST00000636020 IGHV1-45A0A0A0MS14 117 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 LRRC53A6NM62 1247 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 ISM1B1AKI9 464 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 BHMG1C9JSJ3 638 aaPredicted RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 NPIPA5E9PKD4 350 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 ZNHIT1O43257 154 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 ATP1B2P14415 290 aaPredicted RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 ABOP16442 354 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 PRKCIP41743 596 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 ALDH6A1Q02252 535 aaKnown RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 TFF3Q07654 80 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 KIR2DS3Q14952 304 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 PDK1Q15118 436 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 SKOR2Q2VWA4 1001 aaPredicted RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 E4F1Q66K89 784 aaPredicted RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 ZNF449Q6P9G9 518 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 LAPTM4BQ86VI4 370 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 CHERPQ8IWX8 916 aaKnown RBP17.3■□□□□ 0.36
CLN6-212ENST00000636020 TEKT5Q96M29 485 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 ZNF285Q96NJ3 590 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 PPT2Q9UMR5 302 aa17.3■□□□□ 0.36
CLN6-212ENST00000636020 NPIPA1Q9UND3 350 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms