RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 CROTQ9UKG9 612 aa12.18□□□□□ -0.46
CACNA1A-219ENST00000635917 LRRC42Q9Y546 428 aa12.18□□□□□ -0.46
CACNA1A-219ENST00000635917 FAM234BA2RU67 622 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 MGAT4DA6NG13 374 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 SHISA7A6NL88 538 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 RGS14O43566 566 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 RNASEH1O60930 286 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 EGFP01133 1207 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 PDYNP01213 254 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 COL9A1P20849 921 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 JAK1P23458 1154 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 ITPKAP23677 461 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 PLOD1Q02809 727 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 RPS6KA2Q15349 733 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 TMEM259Q4ZIN3 620 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 PAGE3Q5JUK9 113 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 SWT1Q5T5J6 900 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 IL23RQ5VWK5 629 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 ZNF776Q68DI1 518 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 FAM83HQ6ZRV2 1179 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 LRRC56Q8IYG6 542 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 OXR1Q8N573 874 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 TP53I13Q8NBR0 393 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 HM13Q8TCT9 377 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 CSGALNACT1Q8TDX6 532 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 PYDC1Q8WXC3 89 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 ATL1Q8WXF7 558 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 VPS33AQ96AX1 596 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 ASB9Q96DX5 294 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 C1QTNF2Q9BXJ5 285 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 SUCOQ9UBS9 1254 aaKnown RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 TMEM98Q9Y2Y6 226 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 HEATR5BQ9P2D3 2071 aa12.17□□□□□ -0.46
CACNA1A-219ENST00000635917 NME4O00746 187 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 PLRG1O43660 514 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 KRT6AP02538 564 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 KRT6BP04259 564 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 JUPP14923 745 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SLC6A2P23975 617 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 MAP4P27816 1152 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 GNPDA1P46926 289 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 KRT6CP48668 564 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 CCR3P51677 355 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 POLR2JP52435 117 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 AP2B1P63010 937 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 PRKG2Q13237 762 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 NAE1Q13564 534 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 TRIM25Q14258 630 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 NFE2L1Q14494 772 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 C6orf10Q5SRN2 563 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 IER5LQ5T953 404 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 LIPJQ5W064 366 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SUSD1Q6UWL2 747 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 EP400NLQ6ZTU2 488 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 THOC6Q86W42 341 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SLC15A3Q8IY34 581 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 DPP10Q8N608 796 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 FAM156AQ8NDB6 213 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 WDR20Q8TBZ3 569 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 ZNF480Q8WV37 535 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 LRRC58Q96CX6 371 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 HOPXQ9BPY8 73 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 ZDHHC5Q9C0B5 715 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SLC23A2Q9UGH3 650 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 NEUROG3Q9Y4Z2 214 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 GRXCR2A6NFK2 248 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 ANGPT2O15123 496 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 PCDH8O95206 1070 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 FUCA1P04066 466 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 CASP2P42575 452 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 RPL38P63173 70 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 ZNF33BQ06732 778 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 FOXM1Q08050 763 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 RPA4Q13156 261 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 CHIT1Q13231 466 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 CCDC6Q16204 474 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 USP39Q53GS9 565 aaKnown RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 CRTC3Q6UUV7 619 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 LAYNQ6UX15 382 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 LRRC74BQ6ZQY2 392 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 RALGPS2Q86X27 583 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SLC26A7Q8TE54 656 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 NUDT8Q8WV74 236 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 C11orf24Q96F05 449 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 FCRL1Q96LA6 429 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SLC6A17Q9H1V8 727 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 FBRSQ9HAH7 460 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 C1orf109Q9NX04 203 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SLAMF8Q9P0V8 285 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 SNX6Q9UNH7 406 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 POLR3HQ9Y535 204 aaPredicted RBP12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 PCDHA9Q9Y5H5 950 aa12.16□□□□□ -0.46
CACNA1A-219ENST00000635917 DYTNA2CJ06 578 aa12.15□□□□□ -0.46
CACNA1A-219ENST00000635917 PRR19A6NJB7 356 aa12.15□□□□□ -0.46
CACNA1A-219ENST00000635917 C2CD4DB7Z1M9 353 aa12.15□□□□□ -0.46
CACNA1A-219ENST00000635917 RNASEH2AO75792 299 aaKnown RBP12.15□□□□□ -0.46
CACNA1A-219ENST00000635917 PAK4O96013 591 aaPredicted RBP12.15□□□□□ -0.46
CACNA1A-219ENST00000635917 PCCBP05166 539 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms