RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 PRICKLE3O43900 615 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 EDF1O60869 148 aaKnown RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 SUPT7LO94864 414 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 SLC34A2O95436 690 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 S100BP04271 92 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 DRD4P21917 467 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 GRK2P25098 689 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 EPHA8P29322 1005 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 PRDX3P30048 256 aaKnown RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 PKLRP30613 574 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HALP42357 657 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 DPP6P42658 865 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 PNLIPRP1P54315 467 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 CBX1P83916 185 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 TAP2Q03519 686 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 NAE1Q13564 534 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 ANKS6Q68DC2 871 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 GOLGA7Q7Z5G4 137 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 GATAD2AQ86YP4 633 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 TRIM42Q8IWZ5 723 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 SDR16C5Q8N3Y7 309 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 C2orf73Q8N5S3 287 aaPredicted RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 GPR156Q8NFN8 814 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 OR52E1Q8NGJ3 308 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 CNDP1Q96KN2 507 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 SGPP1Q9BX95 441 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 WWOXQ9NZC7 414 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 CPNE7Q9UBL6 633 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HAO1Q9UJM8 370 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 SH2B3Q9UQQ2 575 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 HEBP2Q9Y5Z4 205 aa13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 MDC1Q14676 2089 aaKnown RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 ASCC3Q8N3C0 2202 aaKnown RBP13.78□□□□□ -0.2
PHACTR4-209ENST00000633371 KIR2DS5A0A0G2JLQ3 304 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 A0A0G2JNG1 304 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 OR5K4A6NMS3 321 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 KIR2DS3K7RE56 304 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 PPM1DO15297 605 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 H2AFYO75367 372 aaKnown RBP13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 STK16O75716 305 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 ANXA6P08133 673 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 NEFHP12036 1026 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 MPSTP25325 297 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 PEBP1P30086 187 aaKnown RBP13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 HNMTP50135 292 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 YBX1P67809 324 aaKnown RBP13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 SH3BP2P78314 561 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 CLCQ05315 142 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 KIR2DS5Q14953 304 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 ATG16L1Q676U5 607 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 FAM47EQ6ZV65 393 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 RABEPKQ7Z6M1 372 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 TCAIMQ8N3R3 496 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 ARL14Q8N4G2 192 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 TEX9Q8N6V9 391 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 CXorf40BQ96DE9 158 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 SHCBP1LQ9BZQ2 653 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 SLC32A1Q9H598 525 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 GAREM1Q9H706 876 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 FGFR1OP2Q9NVK5 253 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 PNPOQ9NVS9 261 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 THAP1Q9NVV9 213 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 SPATA7Q9P0W8 599 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 TNPO3Q9Y5L0 923 aaKnown RBP13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 VPS13AQ96RL7 3174 aa13.77□□□□□ -0.21
PHACTR4-209ENST00000633371 LY6G6EA0A0G2JKS1 128 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 GMNCA6NCL1 334 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 K7EPI3 171 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 TRIM38O00635 465 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 CCNT2O60583 730 aaKnown RBP13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 WDR47O94967 919 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 RPN2P04844 631 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 MYF5P13349 255 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 NPPBP16860 134 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 ASPHQ12797 758 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 TRAF3Q13114 568 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 GTF2H2Q13888 395 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 GPR18Q14330 331 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 ARHGAP19Q14CB8 494 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 LAIR1Q6GTX8 287 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 GTF2H2CQ6P1K8 395 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 METTL2BQ6P1Q9 378 aaKnown RBP13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 SUSD1Q6UWL2 747 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 RAB44Q7Z6P3 723 aaPredicted RBP13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 SYVN1Q86TM6 617 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 THOC6Q86W42 341 aaKnown RBP13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 ADGRF3Q8IZF5 1079 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 KYQ8NBH2 561 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 OR52B6Q8NGF0 335 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 OR2L8Q8NGY9 312 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 PPP1R14CQ8TAE6 165 aa13.76□□□□□ -0.21
PHACTR4-209ENST00000633371 FLVCR1-AS1Q8TAF5 88 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms