RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 NCBP2P52298 156 aaKnown RBP eCLIP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 TAS2R43P59537 309 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZNF662Q6ZS27 426 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 ING5Q8WYH8 240 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 ACO2Q99798 780 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 DEC1Q9P2X7 70 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 MRC1P22897 1456 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 MTCL1Q9Y4B5 1905 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 MLLT3P42568 568 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 RPL6Q02878 288 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 ABRAXAS2Q15018 415 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 MFSD5Q6N075 450 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 UNQ6126/PRO20091Q6UXV3 157 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 MRPL41Q8IXM3 137 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 TOP1MTQ969P6 601 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 ALKBH4Q9NXW9 302 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 FESP07332 822 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 TMEM164Q5U3C3 297 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 DCDC5Q6ZRR9 648 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 ACAT2Q9BWD1 397 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 OR10A4Q9H209 315 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 CHST7Q9NS84 486 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 CFAP97Q9P2B7 532 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 FAM86B1E9PN63 330 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 E2F3O00716 465 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 GNA12Q03113 381 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 C7orf26Q96N11 449 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 POLR2J3Q9H1A7 115 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 LHX5Q9H2C1 402 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 KAT8Q9H7Z6 458 aaKnown RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 PRKAB1Q9Y478 270 aa12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLITRK3O94933 977 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 SHBGP04278 402 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 LHCGRP22888 699 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 AHCYP23526 432 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 CXCR1P25024 350 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 OR2B6P58173 313 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 C9orf57Q5W0N0 161 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 EGFLAMQ63HQ2 1017 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 FOXR2Q6PJQ5 311 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 SLC22A18Q96BI1 424 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 IL12RB2Q99665 862 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ATG10Q9H0Y0 220 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ARL8BQ9NVJ2 186 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 PLEKHG4Q58EX7 1191 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 HECTD2Q5U5R9 776 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 FBXW2Q9UKT8 454 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 RAI2Q9Y5P3 530 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZBTB11O95625 1053 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 HCKP08631 526 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 AFF1P51825 1210 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TRAM1Q15629 374 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 RAB30Q15771 203 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TLR5O60602 858 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 HRGP04196 525 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 IFI44LQ53G44 452 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 CBR4Q8N4T8 237 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 CD99L2Q8TCZ2 262 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TP53BP1Q12888 1972 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 HSBP1L1C9JCN9 74 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 POP4O95707 220 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 DRD4P21917 467 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 F8A1P23610 371 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 MAD2L1BPQ15013 274 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 RBM48Q5RL73 367 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ANKS1BQ7Z6G8 1248 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ZFP3Q96NJ6 502 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 SYT4Q9H2B2 425 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TREM1Q9NP99 234 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 HSPA12AO43301 675 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 MAFO75444 373 aaPredicted RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 CSTBP04080 98 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ITGA5P08648 1049 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 FOSL1P15407 271 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 PHC1P78364 1004 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 CHAF1BQ13112 559 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TARDBPQ13148 414 aaKnown RBP eCLIP12.93□□□□□ -0.341e-6■■■■□ 23.6
SYNGAP1-208ENST00000629380 FAM174BQ3ZCQ3 159 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 BRSK1Q8TDC3 778 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 RGMAQ96B86 450 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 EIF2B3Q9NR50 452 aaKnown RBP12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TBCCD1Q9NVR7 557 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TIGD6Q17RP2 521 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TREML1Q86YW5 311 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TOMM5Q8N4H5 51 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 TMEM145Q8NBT3 493 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 HERVK_113Q902F9 699 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 AGXTP21549 392 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 FSTL1Q12841 308 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 COPS4Q9BT78 406 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 ABCG8Q9H221 673 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 GLOD4Q9HC38 313 aa12.93□□□□□ -0.34
SYNGAP1-208ENST00000629380 SSU72Q9NP77 194 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms