RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 SLC22A11Q9NSA0 550 aa18.24■□□□□ 0.51
SMN2-215ENST00000628696 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.24■□□□□ 0.51
SMN2-215ENST00000628696 CDC23Q9UJX2 597 aa18.24■□□□□ 0.51
SMN2-215ENST00000628696 DIDO1Q9BTC0 2240 aaKnown RBP18.24■□□□□ 0.51
SMN2-215ENST00000628696 DOPEY1Q5JWR5 2465 aa18.24■□□□□ 0.51
SMN2-215ENST00000628696 PCM1Q15154 2024 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 CENPEQ02224 2701 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 DCTP40126 519 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 GDF10P55107 478 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 SOX8P57073 446 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 AIMP2Q13155 320 aaKnown RBP18.23■□□□□ 0.51
SMN2-215ENST00000628696 HIF1AQ16665 826 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 Q6ZS92 163 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 LINC00523Q86TU6 105 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 TAX1BP1Q86VP1 789 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 DNAAF3Q8N9W5 541 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 OR52K1Q8NGK4 314 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 HDAC10Q969S8 669 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 TTC1Q99614 292 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 TMEM121Q9BTD3 319 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 SLC6A20Q9NP91 592 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 AGPAT4Q9NRZ5 378 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 FBXL4Q9UKA2 621 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 AMFRQ9UKV5 643 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 NTNG1Q9Y2I2 539 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 PCDHGA10Q9Y5H3 936 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 ITPR2Q14571 2701 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 SVILO95425 2214 aa18.23■□□□□ 0.51
SMN2-215ENST00000628696 ZGRF1Q86YA3 2104 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 F8W8V4 182 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 GAS8O95995 478 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 PIM1P11309 404 aaPredicted RBP18.22■□□□□ 0.51
SMN2-215ENST00000628696 PKLRP30613 574 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 GRIA3P42263 894 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 RAB28P51157 221 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 ARSFP54793 590 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 HSPA14Q0VDF9 509 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 DNAJC21Q5F1R6 531 aaKnown RBP18.22■□□□□ 0.51
SMN2-215ENST00000628696 CRB2Q5IJ48 1285 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 IRAK1BP1Q5VVH5 260 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 SHISA6Q6ZSJ9 500 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 WDR77Q9BQA1 342 aaPredicted RBP18.22■□□□□ 0.51
SMN2-215ENST00000628696 SLC2A6Q9UGQ3 507 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 R3HDM2Q9Y2K5 976 aaKnown RBP18.22■□□□□ 0.51
SMN2-215ENST00000628696 CSAG2Q9Y5P2 127 aa18.22■□□□□ 0.51
SMN2-215ENST00000628696 A0A1B0GX78 115 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 GRID2IPA4D2P6 1211 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 GOT2P00505 430 aaKnown RBP18.21■□□□□ 0.51
SMN2-215ENST00000628696 MMP11P24347 488 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 MCM3P25205 808 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 PSMA3P25788 255 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 CCR7P32248 378 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 PRAMEF13Q5VWM6 474 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 OVCH1Q7RTY7 1134 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 PEX26Q7Z412 305 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 VRK3Q8IV63 474 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 PARP9Q8IXQ6 854 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 SLC22A15Q8IZD6 547 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 UBL4BQ8N7F7 174 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 LINC01555Q8NAE3 123 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 OR6P1Q8NGX9 317 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 DENND1AQ8TEH3 1009 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 UBE2Q2Q8WVN8 375 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.21■□□□□ 0.51
SMN2-215ENST00000628696 IL17FQ96PD4 163 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 LACRTQ9GZZ8 138 aa18.21■□□□□ 0.51
SMN2-215ENST00000628696 PACSIN2Q9UNF0 486 aaPredicted RBP18.21■□□□□ 0.51
SMN2-215ENST00000628696 POLEQ07864 2286 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 RPN2P04844 631 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 ITGAXP20702 1163 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 CD9P21926 228 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 CDH17Q12864 832 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 SF1Q15637 639 aaKnown RBP18.2■□□□□ 0.5
SMN2-215ENST00000628696 AGAP7PQ5VUJ5 663 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 FIGLAQ6QHK4 219 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 AFTPHQ6ULP2 937 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 PPP1R21Q6ZMI0 780 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 METTL27Q8N6F8 245 aaPredicted RBP18.2■□□□□ 0.5
SMN2-215ENST00000628696 LRRC57Q8N9N7 239 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 OR13J1Q8NGT2 312 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 DNAJB14Q8TBM8 379 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 ASZ1Q8WWH4 475 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 FKBP10Q96AY3 582 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 SLC22A18Q96BI1 424 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 AGAP4Q96P64 663 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 TSSK1BQ9BXA7 367 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 SOX17Q9H6I2 414 aaPredicted RBP18.2■□□□□ 0.5
SMN2-215ENST00000628696 CUTCQ9NTM9 273 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 INTS7Q9NVH2 962 aaKnown RBP18.2■□□□□ 0.5
SMN2-215ENST00000628696 SLC39A10Q9ULF5 831 aa18.2■□□□□ 0.5
SMN2-215ENST00000628696 NOVA2Q9UNW9 492 aaKnown RBP18.2■□□□□ 0.5
SMN2-215ENST00000628696 REXO2Q9Y3B8 237 aaKnown RBP18.2■□□□□ 0.5
SMN2-215ENST00000628696 TCRBV7S2A1N4TA0A589 114 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 HEATR9A2RTY3 570 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 ENO4A6NNW6 628 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 IQCF5A8MTL0 148 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 BTNL10A8MVZ5 291 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 DSCR3O14972 297 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 ALBP02768 609 aa18.19■□□□□ 0.5
SMN2-215ENST00000628696 OR1D4P47884 311 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms