RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 GPR34Q9UPC5 381 aa12.16□□□□□ -0.46
SYNGAP1-207ENST00000628646 DPPA5A6NC42 116 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 EIF4E1BA6NMX2 242 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZNF839A8K0R7 811 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 DLL1O00548 723 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 ERFP50548 548 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 SF1Q15637 639 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 DEFB133Q30KQ1 61 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 FAM219BQ5XKK7 198 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 BNC2Q6ZN30 1099 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 DENND6BQ8NEG7 585 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 OLFM1Q99784 485 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 C1QTNF2Q9BXJ5 285 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 S100A14Q9HCY8 104 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 FAM86C1Q9NVL1 165 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 SCOCQ9UIL1 159 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 RIMKLBQ9ULI2 386 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 ANAPC1Q9H1A4 1944 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 SKAP2O75563 359 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 COX4I1P13073 169 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 DPP6P42658 865 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 TIAL1Q01085 375 aaKnown RBP eCLIP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 LSM12Q3MHD2 195 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 IRGCQ6NXR0 463 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 Q8N9G6 341 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 RP9Q8TA86 221 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 NUF2Q9BZD4 464 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 SRMSQ9H3Y6 488 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 ADAMTS6Q9UKP5 1117 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 PRSS38A1L453 326 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 MROH6A6NGR9 719 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 IPO13O94829 963 aaKnown RBP12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 CCR5P51681 352 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 YPEL5P62699 121 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 NAE1Q13564 534 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 CYHR1Q6ZMK1 362 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 ZNF765Q7L2R6 523 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 HIPK4Q8NE63 616 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 LYSMD1Q96S90 227 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 POMPQ9Y244 141 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 LRCH1Q9Y2L9 728 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 CHD7Q9P2D1 2997 aa12.15□□□□□ -0.46
SYNGAP1-207ENST00000628646 ESRRBO95718 433 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TYRP1P17643 537 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 IGFALSP35858 605 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM207Q6UWW9 146 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 GATAD2AQ86YP4 633 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 EEF1AKMT1Q8WVE0 214 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 GAREM1Q9H706 876 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 CLCA2Q9UQC9 943 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TNPO3Q9Y5L0 923 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 SLC22A2O15244 555 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 PAX7P23759 505 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 LEPRP48357 1165 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 RALGDSQ12967 914 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 GRAMD1BQ3KR37 738 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 AAGABQ6PD74 315 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 HPS6Q86YV9 775 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 DCP2Q8IU60 420 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 DEFB107AQ8IZN7 70 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 PELI3Q8N2H9 469 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 GAB3Q8WWW8 586 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 KCNJ9Q92806 393 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TM9SF3Q9HD45 589 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 FAM186AA6NE01 2351 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM202A6NGA9 273 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 FADS2P1A8MWK0 482 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 SH3BGRLO75368 114 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 PDE5AO76074 875 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 EFCAB3Q8N7B9 438 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 UBXN10Q96LJ8 280 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZNF184Q99676 751 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 RTKNQ9BST9 563 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TMEM168Q9H0V1 697 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 EIF2S1P05198 315 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TSPAN8P19075 237 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 CTBSQ01459 385 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 FOXB2Q5VYV0 432 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 C11orf96Q7Z7L8 435 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 SYT12Q8IV01 421 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 CLYBLQ8N0X4 340 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 ESAMQ96AP7 390 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 TUBGCP3Q96CW5 907 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 FGF22Q9HCT0 170 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 ACSL5Q9ULC5 683 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZFR2Q9UPR6 939 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 HS3ST3A1Q9Y663 406 aa12.14□□□□□ -0.47
SYNGAP1-207ENST00000628646 WDR47O94967 919 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 PCNAP12004 261 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 CDH3P22223 829 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 EPHA3P29320 983 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 IRF8Q02556 426 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 TBL3Q12788 808 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 RBBP5Q15291 538 aaKnown RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 SPATA24Q86W54 205 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 ZNF761Q86XN6 746 aaPredicted RBP12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 FBXW8Q8N3Y1 598 aa12.13□□□□□ -0.47
SYNGAP1-207ENST00000628646 RASGEF1AQ8N9B8 481 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms