RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 CYP2A7P20853 494 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 CDH3P22223 829 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 SEPHS1P49903 392 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 RAB10P61026 200 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 CYP4F3Q08477 520 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 ARHGAP19Q14CB8 494 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 CYP2A13Q16696 494 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 WDR93Q6P2C0 686 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 BMPERQ8N8U9 685 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 FLVCR1-AS1Q8TAF5 88 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 MDM1Q8TC05 714 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 ANKRD7Q92527 254 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 SLC41A2Q96JW4 573 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 PPM1MQ96MI6 270 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 SLC46A1Q96NT5 459 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 OR2A14Q96R47 310 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 PAFAH2Q99487 392 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 EPB41L4BQ9H329 900 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 PARVBQ9HBI1 364 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 ASCL3Q9NQ33 180 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 OCIAD1Q9NX40 245 aa19.63■□□□□ 0.73
PTCD3-220ENST00000627371 SIDT1Q9NXL6 827 aaKnown RBP19.63■□□□□ 0.73
PTCD3-220ENST00000627371 IGF2RP11717 2491 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 TPRP12270 2363 aaKnown RBP19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ISM1B1AKI9 464 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 B4E171 279 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 PHGDHO43175 533 aaKnown RBP19.62■□□□□ 0.73
PTCD3-220ENST00000627371 TNFSF15O95150 251 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ZBTB11O95625 1053 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-220ENST00000627371 RBMS1P29558 406 aaKnown RBP19.62■□□□□ 0.73
PTCD3-220ENST00000627371 HSD17B2P37059 387 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ETV5P41161 510 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 TSPAN7P41732 249 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 SLC5A12Q1EHB4 618 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ERCC6LQ2NKX8 1250 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 TAX1BP1Q86VP1 789 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 FAM129CQ86XR2 697 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 C2orf73Q8N5S3 287 aaPredicted RBP19.62■□□□□ 0.73
PTCD3-220ENST00000627371 LMNTD1Q8N9Z9 388 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 MCOLN3Q8TDD5 553 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ANKRD49Q8WVL7 239 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 SLC22A18Q96BI1 424 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 CCDC86Q9H6F5 360 aaKnown RBP19.62■□□□□ 0.73
PTCD3-220ENST00000627371 PDE10AQ9Y233 779 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 IKBKGQ9Y6K9 419 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 HEATR5BQ9P2D3 2071 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ACACBO00763 2458 aa19.62■□□□□ 0.73
PTCD3-220ENST00000627371 ACACAQ13085 2346 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 EXOC1LA0A1B0GW35 172 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 HMX2A2RU54 273 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 ZNF839A8K0R7 811 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 CDRT15L2A8MXV6 281 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 SLC16A8O95907 504 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 SYF2O95926 243 aaKnown RBP19.61■□□□□ 0.73
PTCD3-220ENST00000627371 CAPNS1P04632 268 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 MSH2P43246 934 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 MAPK10P53779 464 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 PNLIPRP1P54315 467 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 BMPR2Q13873 1038 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 SLC29A2Q14542 456 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 PHKG1Q16816 387 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 MROH9Q5TGP6 573 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 FBXO38Q6PIJ6 1188 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 CMC1Q7Z7K0 106 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 ZNF578Q96N58 590 aaPredicted RBP19.61■□□□□ 0.73
PTCD3-220ENST00000627371 DERL2Q9GZP9 239 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 ZNF180Q9UJW8 692 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 IKZF3Q9UKT9 509 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 BTRCQ9Y297 605 aa19.61■□□□□ 0.73
PTCD3-220ENST00000627371 APC2O95996 2303 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 A0A0J9YY10 115 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 TMEM8BA6NDV4 472 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 SLC9B1P1A6NJY1 282 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 POC1B-GALNT4F8VUJ3 575 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 PRICKLE3O43900 615 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-220ENST00000627371 ENO2P09104 434 aaPredicted RBP19.6■□□□□ 0.73
PTCD3-220ENST00000627371 ST6GAL1P15907 406 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 CRABP2P29373 138 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 SERPINB9P50453 376 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 RAB15P59190 212 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 ERVPABLB-1P60509 514 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 HSD11B2P80365 405 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 MC2RQ01718 297 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 FASTKQ14296 549 aaKnown RBP19.6■□□□□ 0.73
PTCD3-220ENST00000627371 TBC1D25Q3MII6 688 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 SBSNQ6UWP8 590 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 RAPH1Q70E73 1250 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 TAOK1Q7L7X3 1001 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 CLEC14AQ86T13 490 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 D2HGDHQ8N465 521 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 ZNF480Q8WV37 535 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 DCAKDQ8WVC6 231 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 CCDC138Q96M89 665 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 TRAPPC9Q96Q05 1148 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 DHRS4Q9BTZ2 278 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 B3GNT4Q9C0J1 378 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 FBXO8Q9NRD0 319 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 THSD1Q9NS62 852 aa19.6■□□□□ 0.73
PTCD3-220ENST00000627371 NOVA2Q9UNW9 492 aaKnown RBP19.6■□□□□ 0.73
PTCD3-220ENST00000627371 PCDHGA7Q9Y5G6 932 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms