RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 CFAP206Q8IYR0 622 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 RGL4Q8IZJ4 473 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 HDDC3Q8N4P3 179 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 OXR1Q8N573 874 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 TNIP2Q8NFZ5 429 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 SETD7Q8WTS6 366 aaKnown RBP15.91■□□□□ 0.14
LDB3-208ENST00000623007 DNASE1L2Q92874 299 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 UBE2E3Q969T4 207 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 DPY30Q9C005 99 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 ZDHHC4Q9NPG8 344 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 PHPT1Q9NRX4 125 aaPredicted RBP15.91■□□□□ 0.14
LDB3-208ENST00000623007 CLDND1Q9NY35 253 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 MAP10Q9P2G4 905 aa15.91■□□□□ 0.14
LDB3-208ENST00000623007 MBD1Q9UIS9 605 aaPredicted RBP15.91■□□□□ 0.14
LDB3-208ENST00000623007 ANKRD12Q6UB98 2062 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 KCNE1BA0A087WTH5 132 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 AQP12BA6NM10 295 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 KMOO15229 486 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 MID1O15344 667 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 POP7O75817 140 aaKnown RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 C8BP07358 591 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 G6PDP11413 515 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 XRCC1P18887 633 aaPredicted RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 EPORP19235 508 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 ATP6V1C1P21283 382 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 VARSP26640 1264 aaKnown RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 HALP42357 657 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 SLC7A2P52569 658 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 HNRNPFP52597 415 aaKnown RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 UFM1P61960 85 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 RPL38P63173 70 aaKnown RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 MRPS21P82921 87 aaKnown RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 CDK3Q00526 305 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 RHDQ02161 417 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 CHIT1Q13231 466 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 CPSF6Q16630 551 aaKnown RBP eCLIP15.9■□□□□ 0.14
LDB3-208ENST00000623007 RFTN2Q52LD8 501 aaPredicted RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 AQP12AQ8IXF9 295 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 RAB42Q8N4Z0 105 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 DCBLD1Q8N8Z6 715 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 BHLHE22Q8NFJ8 381 aaPredicted RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 OR9A1PQ8NGU1 263 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 RAD51AP1Q96B01 352 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 CHFRQ96EP1 664 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 NAF1Q96HR8 494 aaKnown RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 MSLNLQ96KJ4 702 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 ZNF184Q99676 751 aaPredicted RBP15.9■□□□□ 0.14
LDB3-208ENST00000623007 C1orf50Q9BV19 199 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 TEX101Q9BY14 249 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 ZNF576Q9H609 170 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 PREBQ9HCU5 417 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 ACSL5Q9ULC5 683 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 FZD4Q9ULV1 537 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 LRRK1Q38SD2 2015 aa15.9■□□□□ 0.14
LDB3-208ENST00000623007 PI15O43692 258 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 MYO1DO94832 1006 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 HOXB6P17509 224 aaKnown RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 POU3F3P20264 500 aaPredicted RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 KELP23276 732 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 DPP6P42658 865 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 METAP1P53582 386 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 SGCGQ13326 291 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 SCIMPQ6UWF3 145 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 USP30Q70CQ3 517 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 RETREG3Q86VR2 466 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 DHFR2Q86XF0 187 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 HID1Q8IV36 788 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 SMRP1Q8NCR6 262 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 PYDC1Q8WXC3 89 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 EFCAB11Q9BUY7 163 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 VCXQ9H320 206 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 RMND5AQ9H871 391 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 GIMAP2Q9UG22 337 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 HCN2Q9UL51 889 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 LRCH1Q9Y2L9 728 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 DYRK1BQ9Y463 629 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 POLR3HQ9Y535 204 aaPredicted RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 K7EQS6 105 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 FFAR3O14843 346 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 ANKRD28O15084 1053 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 GPR42O15529 346 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 KCNH1O95259 989 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 PDYNP01213 254 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 ZNF8P17098 575 aaPredicted RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 SLC6A2P23975 617 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 TRIM23P36406 574 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 CLDN8P56748 225 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 RPS14P62263 151 aaKnown RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 PHEXP78562 749 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 NAE1Q13564 534 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 INPP5AQ14642 412 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 TLR1Q15399 786 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 HIST2H2ACQ16777 129 aaPredicted RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 FBXO43Q4G163 708 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 XKR6Q5GH73 641 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 ZNF648Q5T619 568 aaPredicted RBP15.89■□□□□ 0.13
LDB3-208ENST00000623007 HIST2H2AA3Q6FI13 130 aa15.89■□□□□ 0.13
LDB3-208ENST00000623007 PDZD3Q86UT5 571 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms