RNA–Protein interactions for RNA: ENST00000622308.4

SPPL2B-214, Transcript of signal peptide peptidase like 2B, humanhuman

TSL 1 (best)

Gene SPPL2B, Length 749 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL2B-214ENST00000622308 CSMD2Q7Z408 3487 aa16.47■□□□□ 0.23
SPPL2B-214ENST00000622308 A0A1B0GX78 115 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 ALBP02768 609 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 STSP08842 583 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 NSG1P42857 185 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 EIF3EP60228 445 aaKnown RBP16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 CDC16Q13042 620 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 B3GNTL1Q67FW5 361 aaPredicted RBP16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 SHISA6Q6ZSJ9 500 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 ELMO1Q92556 727 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 ENAMQ9NRM1 1142 aa16.46■□□□□ 0.23
SPPL2B-214ENST00000622308 OR51F1A6NGY5 319 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 PJA2O43164 708 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 MCM3P25205 808 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 PKLRP30613 574 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 PER3P56645 1201 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 COPS2P61201 443 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 GRB7Q14451 532 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 CCDC181Q5TID7 509 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 C11orf63Q6NUN7 778 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 DARS2Q6PI48 645 aaKnown RBP16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 PACS1Q6VY07 963 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 DTWD1Q8N5C7 304 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 CATSPER1Q8NEC5 780 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 OR11G2Q8NGC1 345 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 COG1Q8WTW3 980 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 DLG3Q92796 817 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 CNDP1Q96KN2 507 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 LHPPQ9H008 270 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 SOX17Q9H6I2 414 aaPredicted RBP16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 CTSFQ9UBX1 484 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 EFR3BQ9Y2G0 817 aa16.45■□□□□ 0.22
SPPL2B-214ENST00000622308 MACROD2A1Z1Q3 448 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 VSTM2BA6NLU5 285 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 KLHL18O94889 574 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 METTL18O95568 372 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 FOXN2P32314 431 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 GRIA3P42263 894 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 MAGEA1P43355 309 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 ARSFP54793 590 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 ITIH4Q14624 930 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 POU6F1Q14863 301 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 TLR1Q15399 786 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 ZNF324BQ6AW86 544 aaPredicted RBP16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 FCRL6Q6DN72 434 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 FJX1Q86VR8 437 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 TMTC1Q8IUR5 882 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 C2orf73Q8N5S3 287 aaPredicted RBP16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 STYXQ8WUJ0 223 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 ZNF285Q96NJ3 590 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 FERMT1Q9BQL6 677 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 TRIM56Q9BRZ2 755 aaKnown RBP16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 OSBPL8Q9BZF1 889 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 CUTCQ9NTM9 273 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 PIH1D1Q9NWS0 290 aaKnown RBP16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 CCDC88CQ9P219 2028 aa16.44■□□□□ 0.22
SPPL2B-214ENST00000622308 AKAP9Q99996 3911 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 PDZD2O15018 2839 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 MROH6A6NGR9 719 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 QSOX1O00391 747 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 DSCR3O14972 297 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 OR1I1O60431 355 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 STK10O94804 968 aaKnown RBP16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 MED26O95402 600 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 FTH1P02794 183 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 MSNP26038 577 aaKnown RBP16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 CTNNA1P35221 906 aaKnown RBP16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 PTPN7P35236 360 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 OR1D4P47884 311 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 RAB28P51157 221 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 TUBB8Q3ZCM7 444 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 RPUSD3Q6P087 351 aaKnown RBP16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 AADACL2Q6P093 401 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 LINC00696Q6ZRV3 163 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 VRK3Q8IV63 474 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 MCEMP1Q8IX19 187 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 THOC3Q96J01 351 aaKnown RBP16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 PPP1R2P1Q96PQ5 205 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 PHF12Q96QT6 1004 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 MRM3Q9HC36 420 aaKnown RBP16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 IMPACTQ9P2X3 320 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 CIDEBQ9UHD4 219 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 PCDHA3Q9Y5H8 950 aa16.43■□□□□ 0.22
SPPL2B-214ENST00000622308 DIDO1Q9BTC0 2240 aaKnown RBP16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 PCM1Q15154 2024 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 CCDC162PA2VCL2 907 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 FITM1A5D6W6 292 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 PRSS44E7EML9 344 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 CBFA2T2O43439 604 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 PIM1P11309 404 aaPredicted RBP16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 CD9P21926 228 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 GRNP28799 593 aaKnown RBP16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 CCR7P32248 378 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 TDGF1P3P51864 188 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 PLOD1Q02809 727 aaPredicted RBP16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 MFAP5Q13361 173 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 PARP6Q2NL67 630 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 ISLR2Q6UXK2 745 aa16.42■□□□□ 0.22
SPPL2B-214ENST00000622308 SLC22A15Q8IZD6 547 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms