RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 CDH7Q9ULB5 785 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 PCDHB14Q9Y5E9 798 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 CXCR6O00574 342 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 KPNA5O15131 536 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 SGTAO43765 313 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 CPNE6O95741 557 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ALBP02768 609 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 LINC00271P0C7V0 271 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 THRBP10828 461 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ZNF30P17039 623 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 WDR5P61964 334 aaKnown RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 POLR2LP62875 67 aaKnown RBP9.19□□□□□ -0.94
PDPN-212ENST00000621990 CTBSQ01459 385 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 MTAPQ13126 283 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 MYBPC3Q14896 1274 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 CPSF6Q16630 551 aaKnown RBP eCLIP9.19□□□□□ -0.94
PDPN-212ENST00000621990 SGO1Q5FBB7 561 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 NEK5Q6P3R8 708 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 GPR180Q86V85 440 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ZDHHC13Q8IUH4 622 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 VRK3Q8IV63 474 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ISOC1Q96CN7 298 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 TUBA1CQ9BQE3 449 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 PKD2L2Q9NZM6 624 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 ATXN10Q9UBB4 475 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 INVSQ9Y283 1065 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 TRIM17Q9Y577 477 aa9.19□□□□□ -0.94
PDPN-212ENST00000621990 TSPAN11A1L157 253 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 G3V2T6 193 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 GSTA4O15217 222 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 UGDHO60701 494 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PRAMEF4O60810 478 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 AP2A2O94973 939 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 C8AP07357 584 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SDC1P18827 310 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 DCKP27707 260 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MAPK1P28482 360 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 C21orf58P58505 322 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PLIN5Q00G26 463 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 EPS8Q12929 822 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 OTUD3Q5T2D3 398 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 PRAMEF9Q5VWM5 478 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 FAM117BQ6P1L5 589 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 BRAT1Q6PJG6 821 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 KLHDC8AQ8IYD2 350 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 TTC16Q8NEE8 873 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SELENOMQ8WWX9 145 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SLC47A1Q96FL8 570 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 REXO5Q96IC2 774 aaKnown RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 ITCHQ96J02 903 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 P2RY13Q9BPV8 354 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 OSBPL10Q9BXB5 764 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 ELOVL6Q9H5J4 265 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 OCEL1Q9H607 264 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SOX17Q9H6I2 414 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 ZDHHC6Q9H6R6 413 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 ZNHIT2Q9UHR6 403 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PPT2Q9UMR5 302 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CCL26Q9Y258 94 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 WNT9AO14904 365 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 EFCAB14O75071 495 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CREG1O75629 220 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 FGF18O76093 207 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SEC24DO94855 1032 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 SLCO2B1O94956 709 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 UGT2B4P06133 528 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 HIST1H2AGP0C0S8 130 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 CCL5P13501 91 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 GJA1P17302 382 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 HIST1H2ADP20671 130 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 EPHA5P54756 1037 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PCDH1Q08174 1060 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 HSPA14Q0VDF9 509 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 KCNC3Q14003 757 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 DMC1Q14565 340 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PON2Q15165 354 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PTCHD3Q3KNS1 767 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 GTDC1Q4AE62 458 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 GDPD4Q6W3E5 623 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 KIAA0907Q7Z7F0 614 aaPredicted RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 ADIPOR2Q86V24 386 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 TMEM25Q86YD3 366 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 TERB1Q8NA31 727 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 OR2A12Q8NGT7 310 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 GAB3Q8WWW8 586 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 TBC1D20Q96BZ9 403 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 HIST1H2AHQ96KK5 128 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MUS81Q96NY9 551 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 HIST1H2AJQ99878 128 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 H2AFJQ9BTM1 129 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 SMG9Q9H0W8 520 aaKnown RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 RMND5AQ9H871 391 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 ASAH2Q9NR71 780 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 LIMD1Q9UGP4 676 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MYOFQ9NZM1 2061 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 MTCL1Q9Y4B5 1905 aaKnown RBP9.18□□□□□ -0.94
PDPN-212ENST00000621990 C16orf96A6NNT2 1141 aa9.18□□□□□ -0.94
PDPN-212ENST00000621990 PRKD3O94806 890 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms