RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 COPS5Q92905 334 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TMEM68Q96MH6 324 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 COL21A1Q96P44 957 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 VRK1Q99986 396 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 REPIN1Q9BWE0 567 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SLC6A16Q9GZN6 736 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 C1orf21Q9H246 121 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 FBXO6Q9NRD1 293 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 UCKL1Q9NWZ5 548 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 KCTD5Q9NXV2 234 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ZNHIT2Q9UHR6 403 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 WASHC1A8K0Z3 465 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 WASH3PC4AMC7 463 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 CLDN9O95484 217 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 DBIP07108 87 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 FECHP22830 423 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 CFL1P23528 166 aaKnown RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF81P51508 661 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 CRY2Q49AN0 593 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 LDLRAP1Q5SW96 308 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ETFRF1Q6IPR1 90 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 WASH2PQ6VEQ5 465 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 STRADAQ7RTN6 431 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 COL26A1Q96A83 441 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 UROC1Q96N76 676 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 LRRC3Q9BY71 257 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TBC1D17Q9HA65 648 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 EBF2Q9HAK2 575 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 FANCFQ9NPI8 374 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TAS2R10Q9NYW0 307 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 COMMD3Q9UBI1 195 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TFR2Q9UP52 801 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 A6NCN8 305 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 RFPL1O75677 317 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 IFNA5P01569 189 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 SHBGP04278 402 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 ASGR1P07306 291 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 LINC00032P0C843 101 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 UQCRC1P31930 480 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 LCP2Q13094 533 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 MAD2L1BPQ15013 274 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 GALNT5Q7Z7M9 940 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 PHF13Q86YI8 300 aaPredicted RBP7.04□□□□□ -1.28
COLCA1-205ENST00000620864 IQCKQ8N0W5 287 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 OR2AJ1Q8NGZ0 328 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 OR4L1Q8NH43 312 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 NDC1Q9BTX1 674 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 TAPBPLQ9BX59 468 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 PCDHAC2Q9Y5I4 1007 aa7.04□□□□□ -1.28
COLCA1-205ENST00000620864 CNTNAP2Q9UHC6 1331 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TCRBV9S1A1TA0A576 114 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 A8MX80 341 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TRUB2O95900 331 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MAGP20916 626 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 IL4RP24394 825 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PSMB4P28070 264 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 AQP4P55087 323 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CYCSP99999 105 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TLE2Q04725 743 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SIM2Q14190 667 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 HEPACAMQ14CZ8 416 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TREML2Q5T2D2 321 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF773Q6PK81 442 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 HJURPQ8NCD3 748 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 BBS1Q8NFJ9 593 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 OR10H4Q8NGA5 316 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 KIAA1143Q96AT1 154 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ELMO3Q96BJ8 720 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MTFMTQ96DP5 389 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 OR14A2Q96R54 314 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 AGAP2Q99490 1192 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 RAD9AQ99638 391 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ASAH2Q9NR71 780 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 GPATCH2LQ9NWQ4 482 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MIOSQ9NXC5 875 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CBY1Q9Y3M2 126 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CIB4A0PJX0 185 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 MAP3K6O95382 1288 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 BMP6P22004 513 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CDK2P24941 298 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PEX2P28328 305 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TRIM23P36406 574 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SLC12A3P55017 1021 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ARFRP1Q13795 201 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 LPAL2Q16609 132 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 RAB41Q5JT25 222 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 C17orf64Q86WR6 236 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ZDHHC21Q8IVQ6 265 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 RNF157Q96PX1 679 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TMEM121BQ9BXQ6 578 aaPredicted RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 A0A1B0GVI7 797 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 H0Y858 1186 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 UBXN7O94888 489 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 C22orf31O95567 290 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 KELP23276 732 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 ATP5A1P25705 553 aaKnown RBP7.03□□□□□ -1.28
COLCA1-205ENST00000620864 SMSP52788 366 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 CNTN2Q02246 1040 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 TMEM53Q6P2H8 277 aa7.03□□□□□ -1.28
COLCA1-205ENST00000620864 PSRC1Q6PGN9 363 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms