RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SETD7Q8WTS6 366 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 UBTD2Q8WUN7 234 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF480Q8WV37 535 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 ESAMQ96AP7 390 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 CXorf40BQ96DE9 158 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 MOCOSQ96EN8 888 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 TMEM237Q96Q45 408 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 NUSAP1Q9BXS6 441 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 DRC3Q9H069 523 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SLC32A1Q9H598 525 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 GAREM1Q9H706 876 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SLC40A1Q9NP59 571 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 FSCN3Q9NQT6 498 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 THAP1Q9NVV9 213 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 WWOXQ9NZC7 414 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 SPATA7Q9P0W8 599 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 STOX2Q9P2F5 926 aaPredicted RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 CPNE7Q9UBL6 633 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 TDRKHQ9Y2W6 561 aaKnown RBP7.79□□□□□ -1.16
CPNE3-209ENST00000620393 KNL1Q8NG31 2342 aa7.79□□□□□ -1.16
CPNE3-209ENST00000620393 PLXND1Q9Y4D7 1925 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GMNCA6NCL1 334 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 KRT87PA6NCN2 255 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SRRM3A6NNA2 597 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF839A8K0R7 811 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 TMEM114B3SHH9 223 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 E7ENX8 843 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 K7EPI3 171 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 E2F3O00716 465 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ITM2AO43736 263 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 NOBOXO60393 691 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SNNO75324 88 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SNUPNO95149 360 aaKnown RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 RPS17P08708 135 aaKnown RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GIMD1P0DJR0 217 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ERGP11308 486 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 IMPA1P29218 277 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 EPHA8P29322 1005 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GDF5P43026 501 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 RAB28P51157 221 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 PNLIPRP1P54315 467 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 CDH13P55290 713 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 TAP2Q03519 686 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 CLCQ05315 142 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GALNT1Q10472 559 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GTF2H2Q13888 395 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 RCN2Q14257 317 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 DEFB133Q30KQ1 61 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 FBXO48Q5FWF7 155 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ARL13AQ5H913 290 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GTF2H2CQ6P1K8 395 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 BLOC1S3Q6QNY0 202 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SLC9B2Q86UD5 537 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SFTPA2Q8IWL1 248 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 TRIM48Q8IWZ4 208 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 RBM12BQ8IXT5 1001 aaKnown RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SYTL1Q8IYJ3 562 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 LSMEM2Q8N112 164 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ARL14Q8N4G2 192 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 RAB42Q8N4Z0 105 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 AVL9Q8NBF6 648 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GPR156Q8NFN8 814 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 OR52E1Q8NGJ3 308 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 HMGCLL1Q8TB92 370 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 MAPK15Q8TD08 544 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SLC37A2Q8TED4 501 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF483Q8TF39 744 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 PATE1Q8WXA2 126 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 IL17FQ96PD4 163 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF317Q96PQ6 595 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 TMEM79Q9BSE2 394 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 HGH1Q9BTY7 390 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 TRMOQ9BU70 441 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 MENTQ9BUN1 341 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 TMUB1Q9BVT8 246 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 C20orf27Q9GZN8 174 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ATG10Q9H0Y0 220 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 GSTO2Q9H4Y5 243 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ZNF395Q9H8N7 513 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 IL21RQ9HBE5 538 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ACSS2Q9NR19 701 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 POT1Q9NUX5 634 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 INTS7Q9NVH2 962 aaKnown RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 CIDEBQ9UHD4 219 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 PCTPQ9UKL6 214 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 PLAGL1Q9UM63 463 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 SLC22A14Q9Y267 594 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.78□□□□□ -1.16
CPNE3-209ENST00000620393 ASB1Q9Y576 335 aa7.78□□□□□ -1.16
CPNE3-209ENST00000620393 B4DGG1 531 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PPP6CO00743 305 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PPM1DO15297 605 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 PCDHGA12O60330 932 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CCNT2O60583 730 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 SHOX2O60902 331 aaPredicted RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 WDR47O94967 919 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 CER1O95813 267 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 MLYCDO95822 493 aa7.77□□□□□ -1.17
CPNE3-209ENST00000620393 VIMP08670 466 aaKnown RBP7.77□□□□□ -1.17
CPNE3-209ENST00000620393 ZNF806P0C7X5 589 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms