RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 RCAN2Q14206 197 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 ZNF234Q14588 700 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 C9orf64Q5T6V5 341 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 NEK5Q6P3R8 708 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 MMAAQ8IVH4 418 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 BTN2A2Q8WVV5 523 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 GAB3Q8WWW8 586 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 ROPN1LQ96C74 230 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 GPATCH1Q9BRR8 931 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 BRINP2Q9C0B6 783 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 NKX2-4Q9H2Z4 354 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 ACTL8Q9H568 366 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 RDH14Q9HBH5 336 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 PABPN1LA6NDY0 278 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 SOBPA7XYQ1 873 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 NFATC1O95644 943 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 GRIA3P42263 894 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 EMP3P54852 163 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 DUSP6Q16828 381 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 SYTL3Q4VX76 610 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 TMEM220Q6QAJ8 160 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 VASH1Q7L8A9 365 aaPredicted RBP15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 PDSS2Q86YH6 399 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 RGL4Q8IZJ4 473 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 GLYATL1Q969I3 302 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 SLC12A9Q9BXP2 914 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 IRF2BPLQ9H1B7 796 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 PRM3Q9NNZ6 103 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 FAIMQ9NVQ4 179 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 EPS15L1Q9UBC2 864 aa15.18■□□□□ 0.02
SEMA3B-212ENST00000616701 TSPAN11A1L157 253 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 MANBAO00462 879 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 SEC22BO75396 215 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PABPC4LP0CB38 370 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 DDX5P17844 614 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 S100A1P23297 94 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PDHA2P29803 388 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 GRIA2P42262 883 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 BDKRB1P46663 353 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 EIF2B2P49770 351 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PATL1Q86TB9 770 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 GALNT4Q8N4A0 578 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 SCAIQ8N9R8 606 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 WFIKKN2Q8TEU8 576 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 ZSCAN5AQ9BUG6 496 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 TRIM54Q9BYV2 358 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 SLC32A1Q9H598 525 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 WNT9AO14904 365 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 NUAK1O60285 661 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 NCK1P16333 377 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 TMEM115Q12893 351 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PDCD4Q53EL6 469 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PPP2R2DQ66LE6 453 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 HACD2Q6Y1H2 254 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 SPPL2CQ8IUH8 684 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 LRTOMTQ8WZ04 291 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PLA2G2FQ9BZM2 168 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 GID8Q9NWU2 228 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 DTNAQ9Y4J8 743 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 CCL27Q9Y4X3 112 aa15.17■□□□□ 0.02
SEMA3B-212ENST00000616701 PRAMEF4O60810 478 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SH3BGRLO75368 114 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 CLDN9O95484 217 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 PDYNP01213 254 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 MTHFD1P11586 935 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 EMX2Q04743 252 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 ADGRE1Q14246 886 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 PRAMEF9Q5VWM5 478 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 DHFR2Q86XF0 187 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 KRTCAP2Q8N6L1 136 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 DDHD1Q8NEL9 900 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 FNDC8Q8TC99 324 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 GIPC3Q8TF64 312 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 UBTD2Q8WUN7 234 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 PPM1MQ96MI6 270 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 FAM83CQ9BQN1 747 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SFXN1Q9H9B4 322 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SMOXQ9NWM0 555 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 BCAP29Q9UHQ4 241 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 RIMS3Q9UJD0 308 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SLC27A6Q9Y2P4 619 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 HEMK1Q9Y5R4 338 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 GPC6Q9Y625 555 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 RECQL5O94762 991 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 C8GP07360 202 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 PSMD8P48556 350 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SH3BGRP55822 239 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 TSTA3Q13630 321 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 GBX1Q14549 363 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 TLR1Q15399 786 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 HNRNPA1L2Q32P51 320 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 AMIGO2Q86SJ2 522 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 RALGPS2Q86X27 583 aaPredicted RBP15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SLC22A15Q8IZD6 547 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 LIX1Q8N485 282 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 ASZ1Q8WWH4 475 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 SLCO4A1Q96BD0 722 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 MED8Q96G25 268 aa15.16■□□□□ 0.02
SEMA3B-212ENST00000616701 KXD1Q9BQD3 176 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms