RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 RPRD1BQ9NQG5 326 aaKnown RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 CRLS1Q9UJA2 301 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 VPS9D1Q9Y2B5 631 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 KLHL20Q9Y2M5 609 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 GNPDA1P46926 289 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 PSMD8P48556 350 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 CDKN1CP49918 316 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 GRSF1Q12849 480 aaKnown RBP eCLIP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 TIGD6Q17RP2 521 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ADPRMQ3LIE5 342 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 RFTN2Q52LD8 501 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 INO80DQ53TQ3 878 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 TXNDC8Q6A555 127 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 TXNDC11Q6PKC3 985 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 SPATC1Q76KD6 591 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ARL14EPQ8N8R7 260 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 KCNC2Q96PR1 638 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 TBC1D14Q9P2M4 693 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ABCD2Q9UBJ2 740 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 GABRDO14764 452 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 HLA-DPA1P20036 260 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 MXD1Q05195 221 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 GALNT1Q10472 559 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 GTF2H2Q13888 395 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ATXN7L2Q5T6C5 722 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 GTF2H2CQ6P1K8 395 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ALKAL1Q6UXT8 129 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 MINDY2Q8NBR6 621 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 IGSF8Q969P0 613 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ZNF599Q96NL3 588 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 LRTM1Q9HBL6 345 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 ZBTB20Q9HC78 741 aaPredicted RBP14.04□□□□□ -0.16
EPHB4-210ENST00000616502 TMEM161AQ9NX61 479 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 TRPM5Q9NZQ8 1165 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 PCDHB9Q9Y5E1 797 aa14.04□□□□□ -0.16
EPHB4-210ENST00000616502 CDH23Q9H251 3354 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 UPK3BL1B0FP48 263 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 UPK3BL2E5RIL1 263 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 SCELO95171 688 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 ALDH1A1P00352 501 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 ATP5C1P36542 298 aaKnown RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 DCTP40126 519 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 FAM189BP81408 668 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PHKG1Q16816 387 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 CTU2Q2VPK5 515 aaKnown RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 AFTPHQ6ULP2 937 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 MON1AQ86VX9 555 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PROKR1Q8TCW9 393 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 APOLD1Q96LR9 279 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 TSGA13Q96PP4 275 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 TNKS2Q9H2K2 1166 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 TRPV5Q9NQA5 729 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 SH3BP4Q9P0V3 963 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 B3GNT3Q9Y2A9 372 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 TET1Q8NFU7 2136 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 KRT6AP02538 564 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 KRT6BP04259 564 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PGRP06401 933 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 KRT6CP48668 564 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 CYP4F8P98187 520 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 DESI1Q6ICB0 168 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 KBTBD8Q8NFY9 601 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 OR9Q1Q8NGQ5 310 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 BRSK1Q8TDC3 778 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 TTPALQ9BTX7 342 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 NUSAP1Q9BXS6 441 aaKnown RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 NSUN3Q9H649 340 aaKnown RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 CCNB1IP1Q9NPC3 277 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 SLC45A1Q9Y2W3 748 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 TESMINQ9Y4I5 508 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 HAS3O00219 553 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 HIST1H2AGP0C0S8 130 aaPredicted RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 SELPP16109 830 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PFKLP17858 780 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 HIST1H2ADP20671 130 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 CD40LGP29965 261 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 STC1P52823 247 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PPP5CP53041 499 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PDE12Q6L8Q7 609 aaKnown RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 GOLM1Q8NBJ4 401 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 FBXO22Q8NEZ5 403 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 UBE2FQ969M7 185 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 MTERF3Q96E29 417 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 HIST1H2AHQ96KK5 128 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 HIST1H2AJQ99878 128 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 H2AFJQ9BTM1 129 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 AMBRA1Q9C0C7 1298 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 FBXO44Q9H4M3 255 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 ZFP37Q9Y6Q3 630 aaPredicted RBP14.03□□□□□ -0.16
EPHB4-210ENST00000616502 PTPRFP10586 1907 aa14.03□□□□□ -0.16
EPHB4-210ENST00000616502 SOBPA7XYQ1 873 aa14.02□□□□□ -0.16
EPHB4-210ENST00000616502 VIPP01282 170 aa14.02□□□□□ -0.16
EPHB4-210ENST00000616502 FGF4P08620 206 aa14.02□□□□□ -0.16
EPHB4-210ENST00000616502 SYN1P17600 705 aa14.02□□□□□ -0.16
EPHB4-210ENST00000616502 SLC11A2P49281 568 aa14.02□□□□□ -0.16
EPHB4-210ENST00000616502 ARPC4P59998 168 aa14.02□□□□□ -0.16
EPHB4-210ENST00000616502 MAD2L1Q13257 205 aaPredicted RBP14.02□□□□□ -0.16
EPHB4-210ENST00000616502 CBX2Q14781 532 aaPredicted RBP14.02□□□□□ -0.16
EPHB4-210ENST00000616502 TLR9Q9NR96 1032 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms