RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ALPPP05187 535 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 CAPN1P07384 714 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 PTGER4P35408 488 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 ELK3P41970 407 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 SPINT3P49223 89 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 HSD11B2P80365 405 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 CDH17Q12864 832 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 MPP3Q13368 585 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 PCSK7Q16549 785 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 KCTD19Q17RG1 926 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 FNBP1LQ5T0N5 605 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 Q6ZS92 163 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 KMT5CQ86Y97 462 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 ANKMY2Q8IV38 441 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 RBM12BQ8IXT5 1001 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 DSELQ8IZU8 1212 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 TTC30BQ8N4P2 665 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 OR2W6PQ8NHA6 318 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 SPATA22Q8NHS9 363 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 CDKL2Q92772 493 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZNF501Q96CX3 271 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 CHMP2BQ9UQN3 213 aa17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 DIDO1Q9BTC0 2240 aaKnown RBP17.07■□□□□ 0.32
TRAPPC3-209ENST00000616395 DCHS2Q6V1P9 2916 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 TCRBV7S3A2A0A539 114 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 H3BQF6 201 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 MT-CYBP00156 380 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 POLBP06746 335 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZNF7P17097 686 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 CBX1P83916 185 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 MYBPC3Q14896 1274 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 RASA2Q15283 850 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 FAM198BQ6UWH4 519 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 FJX1Q86VR8 437 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 RAVER1Q8IY67 606 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 D2HGDHQ8N465 521 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZADH2Q8N4Q0 377 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 UHMK1Q8TAS1 419 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 EBNA1BP2Q99848 306 aaKnown RBP17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 SLC25A51Q9H1U9 297 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZBTB20Q9HC78 741 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 UBP1Q9NZI7 540 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 SENP1Q9P0U3 644 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 TEX264Q9Y6I9 313 aa17.06■□□□□ 0.32
TRAPPC3-209ENST00000616395 C1orf232A0A0U1RR37 186 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 SMIM23A6NLE4 172 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 DIAPH2O60879 1101 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 SNRPB2P08579 225 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 PIRTP0C851 137 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 PGAM1P18669 254 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 CA4P22748 312 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 OTX2P32243 289 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 CD68P34810 354 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 RORAP35398 523 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 MSH2P43246 934 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 ART3Q13508 389 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 TESK1Q15569 626 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 QPCTQ16769 361 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 ADGRG6Q86SQ4 1221 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 TDRPQ86YL5 185 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 OR8K5Q8NH50 307 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 TM9SF4Q92544 642 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 CLIP3Q96DZ5 547 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 IMP4Q96G21 291 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 PWWP2AQ96N64 755 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 IL22Q9GZX6 179 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZNF552Q9H707 407 aaPredicted RBP17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 CNOT10Q9H9A5 744 aaKnown RBP17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 TRIM39Q9HCM9 518 aa17.05■□□□□ 0.32
TRAPPC3-209ENST00000616395 TLCD2A6NGC4 264 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 CHUKO15111 745 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 KMOO15229 486 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 SLC25A14O95258 325 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 SLC4A1P02730 911 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 INHBAP08476 426 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 NAB1Q13506 487 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 AGAP9Q5VTM2 703 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 WASH2PQ6VEQ5 465 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 MRGPREQ86SM8 312 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 LRRTM4Q86VH4 590 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 CAND1Q86VP6 1230 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 RAB43Q86YS6 212 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 ZNF547Q8IVP9 402 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 GALNT16Q8N428 558 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 GSDMBQ8TAX9 411 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 GRHL3Q8TE85 626 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 CFAP36Q96G28 342 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 TIMM29Q9BSF4 260 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 EPB41L4BQ9H329 900 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 ACSS3Q9H6R3 686 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 LATS2Q9NRM7 1088 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 PSMC3IPQ9P2W1 217 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 NOVA2Q9UNW9 492 aaKnown RBP17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 WDR37Q9Y2I8 494 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 CSAG2Q9Y5P2 127 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 MTORP42345 2549 aa17.04■□□□□ 0.32
TRAPPC3-209ENST00000616395 MED13LQ71F56 2210 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 A0A1B0GUH1 482 aa17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 UBA6A0AVT1 1052 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC3-209ENST00000616395 GPR89AB7ZAQ6 455 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms