RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	CAPG	P40121	348 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PPP3CC	P48454	512 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ESRRG	P62508	458 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	B4GALNT1	Q00973	533 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SUZ12	Q15022	739 aa	Known RBP	13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TCEAL8	Q8IYN2	117 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	DPP10	Q8N608	796 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NAT16	Q8N8M0	369 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SCAMP4	Q969E2	229 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	EGLN2	Q96KS0	407 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NTN4	Q9HB63	628 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PARVB	Q9HBI1	364 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SLC25A37	Q9NYZ2	338 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SPG21	Q9NZD8	308 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PDE10A	Q9Y233	779 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ST14	Q9Y5Y6	855 aa		13.56	□□□□□ -0.24
CACNA1C-231	ENST00000616390		A0A087WXM4	84 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	LEFTY2	O00292	366 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	CLDN9	O95484	217 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	CST1	P01037	141 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	CXCL10	P02778	98 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ACR	P10323	421 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	BCKDHA	P12694	445 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	CDH1	P12830	882 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NSG1	P42857	185 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SNRPD1	P62314	119 aa	Known RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	DDX39B	Q13838	428 aa	Known RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SF1	Q15637	639 aa	Known RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NKG7	Q16617	165 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TTLL9	Q3SXZ7	439 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	MPPE1	Q53F39	396 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ABRAXAS1	Q6UWZ7	409 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TMEM25	Q86YD3	366 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	C10orf111	Q8N326	155 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	LINC00469	Q8N7U9	141 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	OSCP1	Q8WVF1	389 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HHIPL1	Q96JK4	782 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	EBPL	Q9BY08	206 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ADNP	Q9H2P0	1102 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SUV39H2	Q9H5I1	410 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ELOVL6	Q9H5J4	265 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SLC22A14	Q9Y267	594 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SCN8A	Q9UQD0	1980 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	OBSL1	O75147	1896 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	KIAA0100	Q14667	2235 aa	Known RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	OR2AG2	A6NM03	316 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SLC28A1	O00337	649 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	C1QC	P02747	245 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	EFNA1	P20827	205 aa	Predicted RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	JAK1	P23458	1154 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TACR1	P25103	407 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	S100A5	P33763	92 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ALDH3B2	P48448	385 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TPD52	P55327	224 aa	Predicted RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PMS2P3	Q13401	168 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ZXDC	Q2QGD7	858 aa	Predicted RBP	13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SORCS1	Q8WY21	1168 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	FOXJ1	Q92949	421 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	INPP5K	Q9BT40	448 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SLC46A2	Q9BY10	475 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ACPT	Q9BZG2	426 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ING2	Q9H160	280 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	MUC13	Q9H3R2	512 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	MTG2	Q9H4K7	406 aa		13.55	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TRIM43B	A6NCK2	446 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PRKD3	O94806	890 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	GGT1	P19440	569 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HIST1H2AD	P20671	130 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	KIAA0040	Q15053	153 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	GPR107	Q5VW38	600 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SLC39A5	Q6ZMH5	540 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	MACC1	Q6ZN28	852 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TPRG1	Q6ZUI0	275 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HM13	Q8TCT9	377 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ERLEC1	Q96DZ1	483 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	SCRN2	Q96FV2	425 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HIST1H2AH	Q96KK5	128 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	HIST1H2AJ	Q99878	128 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	H2AFJ	Q9BTM1	129 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	POLR1B	Q9H9Y6	1135 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TMEM39A	Q9NV64	488 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	KCTD5	Q9NXV2	234 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	NEUROG3	Q9Y4Z2	214 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PCDHB14	Q9Y5E9	798 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TRBV5-4	A0A0C4DH59	114 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ARNTL	O00327	626 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	DEAF1	O75398	565 aa	Predicted RBP	13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	EBLN1	P0CF75	366 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	RAP2A	P10114	183 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ARSF	P54793	590 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PHC1	P78364	1004 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	IL1RL1	Q01638	556 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	PTCHD3	Q3KNS1	767 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	TMEM259	Q4ZIN3	620 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	IRAK1BP1	Q5VVH5	260 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ASTL	Q6HA08	431 aa	Predicted RBP	13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	USP45	Q70EL2	814 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	MSRB3	Q8IXL7	192 aa		13.54	□□□□□ -0.24
CACNA1C-231	ENST00000616390	ZNF366	Q8N895	744 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms