RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 A0A1W2PQH9 124 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 MED26O95402 600 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 TNFRSF1BP20333 461 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 POU6F2P78424 691 aaPredicted RBP12.88□□□□□ -0.35
MSH6-214ENST00000616033 KIAA1191Q96A73 305 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 CDKN2AIPNLQ96HQ2 116 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 TSGA13Q96PP4 275 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 MRPL9Q9BYD2 267 aaKnown RBP12.88□□□□□ -0.35
MSH6-214ENST00000616033 MMP28Q9H239 520 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 MUC13Q9H3R2 512 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 NMUR1Q9HB89 426 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 TIGARQ9NQ88 270 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 NECTIN3Q9NQS3 549 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 PCDHGC4Q9Y5F7 938 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 SIP14410 1827 aa12.88□□□□□ -0.35
MSH6-214ENST00000616033 PTGESO14684 152 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 IRAK2O43187 625 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 ZW10O43264 779 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 VPS4BO75351 444 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 PGRP06401 933 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 MSH3P20585 1137 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 POU1F1P28069 291 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 GRK5P34947 590 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 SEMG2Q02383 582 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 SMARCB1Q12824 385 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DDR2Q16832 855 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 UAP1L1Q3KQV9 507 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 ATAD3CQ5T2N8 411 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 ARMC4Q5T2S8 1044 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 PSAPL1Q6NUJ1 521 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DOK6Q6PKX4 331 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 MBOAT1Q6ZNC8 495 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 GLT6D1Q7Z4J2 308 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 NRARPQ7Z6K4 114 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 ZNF598Q86UK7 904 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 PIANPQ8IYJ0 282 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 PGBD5Q8N414 524 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 LPCAT1Q8NF37 534 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 MIOSQ9NXC5 875 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 SLC25A37Q9NYZ2 338 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 OGDHLQ9ULD0 1010 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 RNF6Q9Y252 685 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 AGAP5A6NIR3 686 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 C12orf71A8MTZ7 269 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 MUSKO15146 869 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 HOXC11O43248 304 aaPredicted RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 TLL1O43897 1013 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DARSP14868 501 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 WARSP23381 471 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 OR1E1P30953 314 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 RPL34P49207 117 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 TGM4P49221 684 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 PDE12Q6L8Q7 609 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 ASCC1Q8N9N2 400 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 GALNT6Q8NCL4 622 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 ZNF548Q8NEK5 533 aaPredicted RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 BRSK1Q8TDC3 778 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 IMP4Q96G21 291 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 TFB2MQ9H5Q4 396 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 FKBPLQ9UIM3 349 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 WBP11Q9Y2W2 641 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 LOC105371267A0A1B0GV96 52 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 CPNE3O75131 537 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 FHP07954 510 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 STSP08842 583 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DNAJB1P25685 340 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 GPR15P49685 360 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DEFA1P59665 94 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DEFA3P59666 94 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 IL2P60568 153 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 SNRPD2P62316 118 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 SLC35A2P78381 396 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 TIGD5Q53EQ6 642 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 STX19Q8N4C7 294 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 RTL3Q8N8U3 475 aaKnown RBP12.87□□□□□ -0.35
MSH6-214ENST00000616033 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 SETD9Q8NE22 299 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 DNASE1L2Q92874 299 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 APOL4Q9BPW4 351 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 KATNAL1Q9BW62 490 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 GPR83Q9NYM4 423 aa12.87□□□□□ -0.35
MSH6-214ENST00000616033 SSC5DA1L4H1 1573 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 VPS26AO75436 327 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 TP53P04637 393 aaPredicted RBP12.86□□□□□ -0.35
MSH6-214ENST00000616033 PTGS2P35354 604 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 DDX39BQ13838 428 aaKnown RBP12.86□□□□□ -0.35
MSH6-214ENST00000616033 TBRG1Q3YBR2 411 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 RUNDC3AQ59EK9 446 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 ZNF621Q6ZSS3 439 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 AMER2Q8N7J2 671 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 RHBDF1Q96CC6 855 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 RPRD1BQ9NQG5 326 aaKnown RBP12.86□□□□□ -0.35
MSH6-214ENST00000616033 FBXO8Q9NRD0 319 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 ZIM2Q9NZV7 527 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 KLHL20Q9Y2M5 609 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 RPP40O75818 363 aaKnown RBP12.86□□□□□ -0.35
MSH6-214ENST00000616033 GLUD1P00367 558 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 STC1P52823 247 aa12.86□□□□□ -0.35
MSH6-214ENST00000616033 AIF1P55008 147 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms