RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 ANGPTL1O95841 491 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 CCL5P13501 91 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 ZNF30P17039 623 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 OR4D2P58180 307 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 LSM3P62310 102 aaKnown RBP13.71□□□□□ -0.22
SSBP2-220ENST00000615665 PLA2G4EQ3MJ16 856 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 ZBED5Q49AG3 693 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 PERM1Q5SV97 790 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 UGT2A3Q6UWM9 527 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 MBOAT1Q6ZNC8 495 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 RBM23Q86U06 439 aaKnown RBP13.71□□□□□ -0.22
SSBP2-220ENST00000615665 C11orf74Q86VG3 221 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 C11orf65Q8NCR3 313 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 OR8J3Q8NGG0 315 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 CYB5D2Q8WUJ1 264 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 SMAD5Q99717 465 aaKnown RBP13.71□□□□□ -0.22
SSBP2-220ENST00000615665 RNF38Q9H0F5 515 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 CCNB1IP1Q9NPC3 277 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 PHF24Q9UPV7 400 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 PCDHB3Q9Y5E6 796 aa13.71□□□□□ -0.22
SSBP2-220ENST00000615665 UBFD1O14562 309 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 TEX28O15482 410 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 CHRM1P11229 460 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 BMP2P12643 396 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PPP1R8Q12972 351 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 BBS4Q96RK4 519 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 DUSP26Q9BV47 211 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 YTHDF1Q9BYJ9 559 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ARMC1Q9NVT9 282 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 TMED5Q9Y3A6 229 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 GPR39O43194 453 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 SBK3P0C264 359 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 RFC2P35250 354 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 HNF4AP41235 474 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ALDH3A2P51648 485 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ARF5P84085 180 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 C2orf80Q0P641 193 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PAGE3Q5JUK9 113 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 DPY19L3Q6ZPD9 716 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PELI3Q8N2H9 469 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 MYRFLQ96LU7 910 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ZSCAN5AQ9BUG6 496 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 H3BN98 237 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 CLIC1O00299 241 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ZBTB11O95625 1053 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 OCM2P0CE71 109 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 OCMP0CE72 109 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 TMEM207Q6UWW9 146 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ERI1Q8IV48 349 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PKMYT1Q99640 499 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 TDP1Q9NUW8 608 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 DUS2Q9NX74 493 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 DAPK2Q9UIK4 370 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 GPR45Q9Y5Y3 372 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 CREG1O75629 220 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 RASAL1O95294 804 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 FGBP02675 491 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 TYRP14679 529 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 CLCN2P51788 898 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PNLIPRP1P54315 467 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 USP39Q53GS9 565 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 C17orf64Q86WR6 236 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PHF10Q8WUB8 498 aaKnown RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 PRICKLE1Q96MT3 831 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 ZNF641Q96N77 438 aaPredicted RBP13.7□□□□□ -0.22
SSBP2-220ENST00000615665 NODALQ96S42 347 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 CLSTN3Q9BQT9 956 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 IL26Q9NPH9 171 aa13.7□□□□□ -0.22
SSBP2-220ENST00000615665 TCRBV3S1A0A5B6 114 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CDKL1Q00532 357 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RCAN2Q14206 197 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 TRAF7Q6Q0C0 670 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 TSPAN33Q86UF1 283 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CMTR2Q8IYT2 770 aaKnown RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 C2orf73Q8N5S3 287 aaPredicted RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 TMEM125Q96AQ2 219 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CMTM7Q96FZ5 175 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SLC29A1Q99808 456 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 RASSF1Q9NS23 344 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 WDR70Q9NW82 654 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 TUBA8Q9NY65 449 aaPredicted RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 ANKRD12Q6UB98 2062 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 UPK3BL1B0FP48 263 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 UPK3BL2E5RIL1 263 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 H3BNH8 94 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 WNT9AO14904 365 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SMAD6O43541 496 aaKnown RBP13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SLC35G4P0C7Q5 338 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 HOXC8P31273 242 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SOX6P35712 828 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 ARSFP54793 590 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 SP140Q13342 867 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 LAPTM5Q13571 262 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 Q6ZVL8 140 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 KRTCAP2Q8N6L1 136 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CRISPLD1Q9H336 500 aa13.69□□□□□ -0.22
SSBP2-220ENST00000615665 CCDC177Q9NQR7 707 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms