RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 POP1Q99575 1024 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 NUDT16L1Q9BRJ7 211 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 LRRC3Q9BY71 257 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PKP3Q9Y446 797 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SPTA1P02549 2419 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 MYO18AQ92614 2054 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM72A0PK05 275 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PHYHO14832 338 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 CREB1P16220 341 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 FSHRP23945 695 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 HADHBP55084 474 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 YWHAZP63104 245 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM44Q2T9K0 475 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 KIAA1614Q5VZ46 1190 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 ETV3LQ6ZN32 361 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SPPL2AQ8TCT8 520 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 ABCG4Q9H172 646 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 NCOR1P1Q9H4R4 102 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TRPV4Q9HBA0 871 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 HSFX1Q9UBD0 423 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PPIBP23284 216 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 RAB13P51153 203 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PWP1Q13610 501 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PGM5Q15124 567 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM236Q5W0B7 351 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SSX7Q7RTT5 188 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 RPLP0P6Q8NHW5 317 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 NKRFO15226 690 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 GRIN3BO60391 1043 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 ELAVL2Q12926 359 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 FAM46CQ5VWP2 391 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 BTBD8Q5XKL5 378 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 REP15Q6BDI9 236 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SLC26A9Q7LBE3 791 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TTLL6Q8N841 843 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 FBXL20Q96IG2 436 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PPP1R16BQ96T49 567 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 MECRQ9BV79 373 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SMURF1Q9HCE7 757 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 BHLHE40O14503 412 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SLC16A1P53985 500 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 HNF4GQ14541 408 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 ZBTB37Q5TC79 503 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 SLC25A24Q6NUK1 477 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 NRROSQ86YC3 692 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TSPEARQ8WU66 669 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 NUBP2Q9Y5Y2 271 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 RGPD3A6NKT7 1758 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 RGPD4Q7Z3J3 1758 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PRAF2O60831 178 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 DNAJA1P31689 397 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 POLR2JP52435 117 aaKnown RBP4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PTPN20Q4JDL3 420 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 IQCCQ4KMZ1 466 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 FAM209BQ5JX69 171 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 STEAP3Q658P3 488 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 GRHL2Q6ISB3 625 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 FAM111BQ6SJ93 734 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 LRRC55Q6ZSA7 311 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 PCDH19Q8TAB3 1148 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM41AQ96HV5 264 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 IL25Q9H293 177 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 KIAA1217Q5T5P2 1943 aa4.86□□□□□ -1.63
VPS13D-213ENST00000613099 WASHC1A8K0Z3 465 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 JUNDP17535 347 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SYN1P17600 705 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 APOFQ13790 326 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ASB18Q6ZVZ8 466 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 DSG4Q86SJ6 1040 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 IRF2BP1Q8IU81 584 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ERVK-5Q9HDB9 667 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 USP18Q9UMW8 372 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 BCL9O00512 1426 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 IMPA2O14732 288 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 TYROBPO43914 113 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 NPHS1O60500 1241 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PEX3P56589 373 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 POLR2GP62487 172 aaKnown RBP eCLIP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 MAPKAPK3Q16644 382 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 AP5B1Q2VPB7 878 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 EPHA10Q5JZY3 1008 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 RTL4Q6ZR62 310 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 PARP16Q8N5Y8 322 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 FUZQ9BT04 418 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ADAM7Q9H2U9 754 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 TMEM45AQ9NWC5 275 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 STK25O00506 426 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 RAD17O75943 681 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ADH1CP00326 375 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 HSD17B7P56937 341 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 VLDLRP98155 873 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 SIM2Q14190 667 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-213ENST00000613099 BLOC1S3Q6QNY0 202 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ZNF720Q7Z2F6 126 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 FBXO39Q8N4B4 442 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 IFT43Q96FT9 208 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ZFP3Q96NJ6 502 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 ADAM2Q99965 735 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 LGR6Q9HBX8 967 aa4.85□□□□□ -1.63
VPS13D-213ENST00000613099 C11orf16Q9NQ32 467 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms