RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 BIRC8Q96P09 236 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 TCF12Q99081 682 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RTP3Q9BQQ7 232 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 TRIM8Q9BZR9 551 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RGPD3A6NKT7 1758 aaPredicted RBP10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RGPD4Q7Z3J3 1758 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 C16orf96A6NNT2 1141 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 FPGTO14772 594 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 HDAC3O15379 428 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 TBX1O43435 398 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 RPL38P63173 70 aaKnown RBP10.62□□□□□ -0.71
FAM3A-221ENST00000612856 ATP6AP1LQ52LC2 224 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 PARM1Q6UWI2 310 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 PEX5LQ8IYB4 626 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 FAM3CQ92520 227 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 LRRC39Q96DD0 335 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 SLC38A3Q99624 504 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 TRIM15Q9C019 465 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
FAM3A-221ENST00000612856 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 EI24O14681 340 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TFECO14948 347 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 UBDO15205 165 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 NUDT14O95848 222 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 GSNP06396 782 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 DCNP07585 359 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 IFI30P13284 250 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CLK3P49761 638 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 RPL14P50914 215 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 SGSHP51688 502 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 PPP1R8Q12972 351 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 MADCAM1Q13477 382 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 HSF5Q4G112 596 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CYP4V2Q6ZWL3 525 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CAND1Q86VP6 1230 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 DOK4Q8TEW6 326 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 WDR83Q9BRX9 315 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 DPY30Q9C005 99 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 KCNE2Q9Y6J6 123 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 LCTP09848 1927 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TMEM233B4DJY2 109 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 KLF11O14901 512 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 AQP9O43315 295 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 GUCY1B2O75343 617 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 GCATO75600 419 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 DHRS4L1P0CG22 281 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CD1EP15812 388 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 ATP6V1B2P21281 511 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 IFNA8P32881 189 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TTKP33981 857 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 POLD2P49005 469 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 GRIN2CQ14957 1233 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 NDUFA5Q16718 116 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 ARL13AQ5H913 290 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CACHD1Q5VU97 1274 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 C10orf53Q8N6V4 93 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TMEM145Q8NBT3 493 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 VPS37AQ8NEZ2 397 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 PNPT1Q8TCS8 783 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 MAPK15Q8TD08 544 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 APOLD1Q96LR9 279 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 AARSD1Q9BTE6 412 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 RHOJQ9H4E5 214 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 RERGLQ9H628 205 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 RPF2Q9H7B2 306 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 WDR6Q9NNW5 1121 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 OAZ3Q9UMX2 235 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 EIF3LQ9Y262 564 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 PTPRFP10586 1907 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CACNA1IQ9P0X4 2223 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 ARID2Q68CP9 1835 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 MUC6Q6W4X9 2439 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 EVPLLA8MZ36 301 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TNFRSF10BO14763 440 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 KIAA0355O15063 1070 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 ATG13O75143 517 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 POP7O75817 140 aaKnown RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 ZNF682O95780 498 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 FTH1P02794 183 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 GBAP04062 536 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CYP11A1P05108 521 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 HPGDP15428 266 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CHI3L1P36222 383 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 UBE3AQ05086 875 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CYP4F3Q08477 520 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 NFYCQ13952 458 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 DEPDC1Q5TB30 811 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 CHSY3Q70JA7 882 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TMEFF1Q8IYR6 380 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 PGAM4Q8N0Y7 254 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 SFRP1Q8N474 314 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 DCAF4L2Q8NA75 395 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 STYXQ8WUJ0 223 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 TSACCQ96A04 125 aaPredicted RBP10.61□□□□□ -0.71
FAM3A-221ENST00000612856 SPEF1Q9Y4P9 236 aa10.61□□□□□ -0.71
FAM3A-221ENST00000612856 FAM47E-STBD1D6RA91 191 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 ULK1O75385 1050 aa10.6□□□□□ -0.71
FAM3A-221ENST00000612856 HLA-FP30511 346 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms