RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 XKRXQ6PP77 449 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 CDH24Q86UP0 819 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 FAM20CQ8IXL6 584 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 KBTBD2Q8IY47 623 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 TBC1D21Q8IYX1 336 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 P3H4Q92791 437 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.49■□□□□ 0.237e-8■□□□□ 9.3
CSNK1E-215ENST00000612795 PTGFRNQ9P2B2 879 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 TRHDEQ9UKU6 1024 aa16.49■□□□□ 0.23
CSNK1E-215ENST00000612795 IGLV3-16A0A075B6K0 115 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 CCL22O00626 93 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 LIN7AO14910 233 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 ONECUT2O95948 504 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 CRYABP02511 175 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 TMEM253P0C7T8 217 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 ACRV1P26436 265 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 PEBP1P30086 187 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 PBX1P40424 430 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 CARSP49589 748 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 ZNF140P52738 457 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 GRM7Q14831 915 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 BRD3Q15059 726 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 GPR33Q49SQ1 333 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 LRRC38Q5VT99 294 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 YOD1Q5VVQ6 348 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 NLRP9Q7RTR0 991 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 SERPINA9Q86WD7 417 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 MCATQ8IVS2 390 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 ZNF295-AS1Q8N0V1 137 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 CLDN19Q8N6F1 224 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 TTC29Q8NA56 475 aaPredicted RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 SLC35G2Q8TBE7 412 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 HAUS1Q96CS2 278 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 QKIQ96PU8 341 aaKnown RBP eCLIP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 GBA3Q9H227 469 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 PLA2G3Q9NZ20 509 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 CAPN11Q9UMQ6 739 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 KLHL20Q9Y2M5 609 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 LUC7L2Q9Y383 392 aaKnown RBP16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 MTORP42345 2549 aa16.48■□□□□ 0.23
CSNK1E-215ENST00000612795 ESRRAP11474 423 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 CAPN3P20807 821 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 MCM3P25205 808 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 ARHGAP25P42331 645 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 CDKN2BP42772 138 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 OR1D4P47884 311 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 CDKN1CP49918 316 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 OLIG2Q13516 323 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 SLC18A3Q16572 532 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 SYTL3Q4VX76 610 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 ITPRIPL1Q6GPH6 555 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 SPNS3Q6ZMD2 512 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 TAS2R42Q7RTR8 314 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 PRSS58Q8IYP2 241 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 OR5K2Q8NHB8 316 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 BRIX1Q8TDN6 353 aaKnown RBP16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 ELMO1Q92556 727 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 IQCDQ96DY2 449 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 MESP1Q9BRJ9 268 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 INTS7Q9NVH2 962 aaKnown RBP16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 ABI3Q9P2A4 366 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 MAU2Q9Y6X3 613 aa16.47■□□□□ 0.23
CSNK1E-215ENST00000612795 NF1P21359 2839 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 NSG1A0A0A6YYJ2 146 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 DIAPH2O60879 1101 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 RASAL1O95294 804 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 AP2A1O95782 977 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 F10P00742 488 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 FDXRP22570 491 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 NSG1P42857 185 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 SMSP52788 366 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 OCA2Q04671 838 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 KLC1Q07866 573 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 TESK1Q15569 626 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 ZC3H12BQ5HYM0 836 aaKnown RBP16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 TCTE1Q5JU00 501 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 RANBP10Q6VN20 620 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 SIRT6Q8N6T7 355 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 SUN3Q8TAQ9 357 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 CHTF18Q8WVB6 975 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 C8orf44Q96CB5 159 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 IL1RAPL1Q9NZN1 696 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 MRPS2Q9Y399 296 aaKnown RBP16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 HYOU1Q9Y4L1 999 aa16.46■□□□□ 0.23
CSNK1E-215ENST00000612795 VSTM2BA6NLU5 285 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 HACD1B0YJ81 288 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 QSOX1O00391 747 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 SPOPO43791 374 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 PRICKLE3O43900 615 aaPredicted RBP16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 AP2A2O94973 939 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 FTH1P02794 183 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 PRR35P0CG20 571 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 TPBGLP0DKB5 382 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 MST1P26927 711 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 ACADLP28330 430 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 SOX11P35716 441 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 RAB28P51157 221 aa16.45■□□□□ 0.22
CSNK1E-215ENST00000612795 KRTAP10-9P60411 292 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms