RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 EBF1Q9UH73 591 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 AP3M1Q9Y2T2 418 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 C1orf232A0A0U1RR37 186 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 GMNNO75496 209 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 SLC25A14O95258 325 aaPredicted RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 IL6P05231 212 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 EBLN1P0CF75 366 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 SLC2A4P14672 509 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 CA5AP35218 305 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 MAPK8P45983 427 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 PHKG1Q16816 387 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 GPR33Q49SQ1 333 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 FAM78AQ5JUQ0 283 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 GET4Q7L5D6 327 aaPredicted RBP14.35□□□□□ -0.11
CDH1-213ENST00000612417 OR2T12Q8NG77 320 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 OR2AP1Q8NGE2 309 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 TMBIM1Q969X1 311 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 UGT2B28Q9BY64 529 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 ATP13A3Q9H7F0 1226 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 CXorf21Q9HAI6 301 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 LATS2Q9NRM7 1088 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 DZANK1Q9NVP4 752 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 PRSS21Q9Y6M0 314 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 V9GYQ6 96 aa14.35□□□□□ -0.11
CDH1-213ENST00000612417 K7EPI3 171 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 DFNA5O60443 496 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 ZNF821O75541 412 aaPredicted RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 CPNE6O95741 557 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 GUCA1CO95843 209 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 POLR2EP19388 210 aaKnown RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 GNPDA1P46926 289 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CYP4F3Q08477 520 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 PMS2P3Q13401 168 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 PTGR1Q14914 329 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 RAB39AQ14964 217 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 DHCR24Q15392 516 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 AAK1Q2M2I8 961 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 TMEM214Q6NUQ4 689 aaKnown RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 NPAS3Q8IXF0 933 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CBARPQ8N350 705 aaPredicted RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 FGF13Q92913 245 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 USP7Q93009 1102 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 RSPRY1Q96DX4 576 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CDCA3Q99618 268 aaPredicted RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 EGFL8Q99944 293 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 SH3GL1Q99961 368 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 SLC29A3Q9BZD2 475 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CLMPQ9H6B4 373 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 RMI1Q9H9A7 625 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 WWOXQ9NZC7 414 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 SLCO3A1Q9UIG8 710 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 TSR3Q9UJK0 312 aaKnown RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 CDC14AQ9UNH5 594 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 HS3ST2Q9Y278 367 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 ANGPTL3Q9Y5C1 460 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 AGAP14A8MT82 685 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 ULK1O75385 1050 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 NFKBIAP25963 317 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 PIK3CGP48736 1102 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 DMC1Q14565 340 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 MAPKAPK3Q16644 382 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 FAM174BQ3ZCQ3 159 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CDKL4Q5MAI5 379 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CACHD1Q5VU97 1274 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 C22orf39Q6P5X5 142 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 TTC23LQ6PF05 361 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 CLDN19Q8N6F1 224 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 DNAJB8Q8NHS0 232 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 MYLIPQ8WY64 445 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 LZICQ8WZA0 190 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 MRPL38Q96DV4 380 aaKnown RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 AURKBQ96GD4 344 aaPredicted RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 DPY30Q9C005 99 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 SOX17Q9H6I2 414 aaPredicted RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 MARK1Q9P0L2 795 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 TMEM9Q9P0T7 183 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 IFT80Q9P2H3 777 aaPredicted RBP14.34□□□□□ -0.11
CDH1-213ENST00000612417 KLHL42Q9P2K6 505 aa14.34□□□□□ -0.11
CDH1-213ENST00000612417 TRBV5-3A0A0A0MS03 114 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 GLYATL1P3A0A0U1RQE8 302 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 TRIM16O95361 564 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 ADH1CP00326 375 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 PGRP06401 933 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 THRBP10828 461 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 ADH5P11766 374 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 BPIP17213 487 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 ITGB6P18564 788 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 TPP2P29144 1249 aaPredicted RBP14.33□□□□□ -0.12
CDH1-213ENST00000612417 SERPINA4P29622 427 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 MTHFRP42898 656 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 PTPN5P54829 565 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 GRSF1Q12849 480 aaKnown RBP eCLIP14.33□□□□□ -0.12
CDH1-213ENST00000612417 KCNC3Q14003 757 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 OTUD3Q5T2D3 398 aaPredicted RBP14.33□□□□□ -0.12
CDH1-213ENST00000612417 ZNF773Q6PK81 442 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 ADIPOR2Q86V24 386 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 MSRB3Q8IXL7 192 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 NUDT8Q8WV74 236 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 SMARCD2Q92925 531 aa14.33□□□□□ -0.12
CDH1-213ENST00000612417 POP5Q969H6 163 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms