RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 RHBDF1Q96CC6 855 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 DOK1Q99704 481 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 ACPTQ9BZG2 426 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 PDP1Q9P0J1 537 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-207ENST00000612273 VPS51Q9UID3 782 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF639Q9UID6 485 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 PCDHB7Q9Y5E2 793 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 TDRD15B5MCY1 1934 aaKnown RBP13.72□□□□□ -0.21
COL6A1-207ENST00000612273 M0R129 80 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 MANBAO00462 879 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 F11P03951 625 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 MSH3P20585 1137 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 RPIAP49247 311 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 ISL1P61371 349 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 CAP1Q01518 475 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 GRIK2Q13002 908 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 GTF2IRD2BQ6EKJ0 949 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 LAIR1Q6GTX8 287 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 CXorf57Q6NSI4 855 aaKnown RBP13.72□□□□□ -0.21
COL6A1-207ENST00000612273 GTF2IRD2Q86UP8 949 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 OR52J3Q8NH60 311 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 APIPQ96GX9 242 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF840PA6NDX5 716 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 TRIM64A6NGJ6 449 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 ZNF701M0R085 212 aaPredicted RBP13.72□□□□□ -0.21
COL6A1-207ENST00000612273 STK16O75716 305 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 WDR47O94967 919 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 LCKP06239 509 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
COL6A1-207ENST00000612273 CDK5R2Q13319 367 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 LEMD2Q8NC56 503 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 PSMA8Q8TAA3 256 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 MAL2Q969L2 176 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 MYO19Q96H55 970 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 CD244Q9BZW8 370 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 ROGDIQ9GZN7 287 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 CLEC4EQ9ULY5 219 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 SLC22A14Q9Y267 594 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 TRIM17Q9Y577 477 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
COL6A1-207ENST00000612273 PIKFYVEQ9Y2I7 2098 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 OPN1SWP03999 348 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 IMPDH2P12268 514 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 ITGALP20701 1170 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 JAK1P23458 1154 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 GSTM2P28161 218 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 NUDT6P53370 316 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 RING1Q06587 406 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 NFATC2Q13469 925 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 INAQ16352 499 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 ADPRMQ3LIE5 342 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 ADGRF1Q5T601 910 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 PDE12Q6L8Q7 609 aaKnown RBP13.71□□□□□ -0.21
COL6A1-207ENST00000612273 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 SLC16A12Q6ZSM3 486 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 PAGE2Q7Z2X7 111 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 IFNL1Q8IU54 200 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 CLECL1Q8IZS7 167 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 ZBTB2Q8N680 514 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 ARL14EPQ8N8R7 260 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-207ENST00000612273 HTRA1Q92743 480 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 SH3YL1Q96HL8 342 aaPredicted RBP13.71□□□□□ -0.21
COL6A1-207ENST00000612273 PANX1Q96RD7 426 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 RUBCNLQ9H714 662 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 KAT8Q9H7Z6 458 aaKnown RBP13.71□□□□□ -0.21
COL6A1-207ENST00000612273 INIPQ9NRY2 104 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 C1orf109Q9NX04 203 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 MARCH5Q9NX47 278 aa13.71□□□□□ -0.21
COL6A1-207ENST00000612273 SAMHD1Q9Y3Z3 626 aaKnown RBP13.71□□□□□ -0.21
COL6A1-207ENST00000612273 FAM20BO75063 409 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 MT-ND2P03891 347 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 C7P10643 843 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 GJA1P17302 382 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 HNF1BP35680 557 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 STK19P49842 368 aaPredicted RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 SLC13A2Q13183 592 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 SPOUT1Q5T280 376 aaKnown RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF648Q5T619 568 aaPredicted RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 TXNDC8Q6A555 127 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF551Q7Z340 670 aaPredicted RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 ZCCHC7Q8N3Z6 543 aaKnown RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 BEND7Q8N7W2 519 aaPredicted RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 HDAC2Q92769 488 aaKnown RBP13.71□□□□□ -0.22
COL6A1-207ENST00000612273 NEURL2Q9BR09 285 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 ABCB10Q9NRK6 738 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF229Q9UJW7 825 aa13.71□□□□□ -0.22
COL6A1-207ENST00000612273 ILVBLA1L0T0 632 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 ZNF99A8MXY4 864 aaPredicted RBP13.7□□□□□ -0.22
COL6A1-207ENST00000612273 CLDN25C9JDP6 229 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 ARNTLO00327 626 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 SEC24AO95486 1093 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 GBAP04062 536 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 NUDT7P0C024 238 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 BPIP17213 487 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 DGKAP23743 735 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 MAGEA11P43364 429 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 KIAA0040Q15053 153 aa13.7□□□□□ -0.22
COL6A1-207ENST00000612273 PCBP2Q15366 365 aaKnown RBP eCLIP13.7□□□□□ -0.225e-7■■□□□ 14
COL6A1-207ENST00000612273 ADNP2Q6IQ32 1131 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms