RNA–Protein interactions for RNA: ENST00000611852.4

CCDC28A-202, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-202ENST00000611852 RAB42Q8N4Z0 105 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 C2orf73Q8N5S3 287 aaPredicted RBP16■□□□□ 0.15
CCDC28A-202ENST00000611852 HMGCLL1Q8TB92 370 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 MDM1Q8TC05 714 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 ANKRD49Q8WVL7 239 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC41A2Q96JW4 573 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 OR2A14Q96R47 310 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 PAFAH2Q99487 392 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 PKP4Q99569 1192 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC12A9Q9BXP2 914 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 PITPNM3Q9BZ71 974 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 C1GALT1Q9NS00 363 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 OCIAD1Q9NX40 245 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 LNPEPQ9UIQ6 1025 aa16■□□□□ 0.15
CCDC28A-202ENST00000611852 EFCAB7A8K855 629 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 TNFSF15O95150 251 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC16A8O95907 504 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 NELFEP18615 380 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ETV5P41161 510 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 RAB10P61026 200 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 BMPR2Q13873 1038 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC29A2Q14542 456 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ARHGAP19Q14CB8 494 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 MROH9Q5TGP6 573 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 FBXO38Q6PIJ6 1188 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 FAM129CQ86XR2 697 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 KMT5CQ86Y97 462 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 BMPERQ8N8U9 685 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 MCOLN3Q8TDD5 553 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ANKRD7Q92527 254 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 PARVBQ9HBI1 364 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ASCL3Q9NQ33 180 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 SIDT1Q9NXL6 827 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 DKK4Q9UBT3 224 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 IKZF3Q9UKT9 509 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 PDE10AQ9Y233 779 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 TPRP12270 2363 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ISM1B1AKI9 464 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 B4E171 279 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 POC1B-GALNT4F8VUJ3 575 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 PRICKLE3O43900 615 aaPredicted RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ZBTB11O95625 1053 aaPredicted RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 SYF2O95926 243 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 INHBAP08476 426 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 CYP2A7P20853 494 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 CDH3P22223 829 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 RBMS1P29558 406 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 HSD17B2P37059 387 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 TSPAN7P41732 249 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 MLLT3P42568 568 aaPredicted RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 MAPK10P53779 464 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 FASTKQ14296 549 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 PHKG1Q16816 387 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 CMC1Q7Z7K0 106 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 TAX1BP1Q86VP1 789 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC22A18Q96BI1 424 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 CCDC86Q9H6F5 360 aaKnown RBP15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 IKBKGQ9Y6K9 419 aa15.99■□□□□ 0.15
CCDC28A-202ENST00000611852 ACACBO00763 2458 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 IGF2RP11717 2491 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 FREM2Q5SZK8 3169 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 EXOC1LA0A1B0GW35 172 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC9B1P1A6NJY1 282 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 CDRT15L2A8MXV6 281 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 DYNC1I1O14576 645 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 SNRNP200O75643 2136 aaKnown RBP15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC35E2BP0CK96 405 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 PVRP15151 417 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 MSH2P43246 934 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 CSRP3P50461 194 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 SH3BP2P78314 561 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 HSD11B2P80365 405 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 MC2RQ01718 297 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 SLC5A12Q1EHB4 618 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 SBSNQ6UWP8 590 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 TRIM73Q86UV7 250 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 ZNF480Q8WV37 535 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 DCAKDQ8WVC6 231 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 UBXN10Q96LJ8 280 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 CCDC138Q96M89 665 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 TRAPPC9Q96Q05 1148 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 DERL2Q9GZP9 239 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 ZNF180Q9UJW8 692 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 BTRCQ9Y297 605 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 ANKRD12Q6UB98 2062 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 ADAMTS20P59510 1910 aa15.98■□□□□ 0.15
CCDC28A-202ENST00000611852 A0A0J9YY10 115 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 A0A1W2PPV9 198 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 CDC7O00311 574 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 ENO2P09104 434 aaPredicted RBP15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 CCDC166P0CW27 439 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 ST6GAL1P15907 406 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 GCAP28676 217 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 IMPA1P29218 277 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 CRABP2P29373 138 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 SERPINB9P50453 376 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 PNLIPRP1P54315 467 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 KCNAB1Q14722 419 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 PPP1R3AQ16821 1122 aa15.97■□□□□ 0.15
CCDC28A-202ENST00000611852 MBOAT1Q6ZNC8 495 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms