RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 GIMAP7Q8NHV1 300 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 FLVCR1-AS1Q8TAF5 88 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 HNRNPLLQ8WVV9 542 aaKnown RBP13.8□□□□□ -0.2
HDDC2-206ENST00000608461 NKD1Q969G9 470 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 FAM136AQ96C01 138 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 SLC30A3Q99726 388 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 CTRCQ99895 268 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 EFHD1Q9BUP0 239 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 FAM117AQ9C073 453 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 APMAPQ9HDC9 416 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 ZDHHC18Q9NUE0 388 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 SOHLH2Q9NX45 425 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 MTRF1LQ9UGC7 380 aaKnown RBP13.8□□□□□ -0.2
HDDC2-206ENST00000608461 CFAP47Q6ZTR5 3102 aa13.8□□□□□ -0.2
HDDC2-206ENST00000608461 ISM1B1AKI9 464 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 TARM1B6A8C7 271 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 SLC16A5O15375 505 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 STK17BO94768 372 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 DLGAP3O95886 979 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 C8GP07360 202 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 EBLN1P0CF75 366 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ST6GAL1P15907 406 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 FDXRP22570 491 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ITPKBP27987 946 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 SSTR1P30872 391 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 IL2P60568 153 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 TIAL1Q01085 375 aaKnown RBP eCLIP13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ABHD18Q0P651 414 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 SP140Q13342 867 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 PDAP1Q13442 181 aaKnown RBP13.79□□□□□ -0.2
HDDC2-206ENST00000608461 HECTD2Q5U5R9 776 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 STRA8Q7Z7C7 330 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ZC3HC1Q86WB0 502 aaKnown RBP13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ESX1Q8N693 406 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ANKRD7Q92527 254 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 PMEPA1Q969W9 287 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ZUFSPQ96AP4 578 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ZNF501Q96CX3 271 aaPredicted RBP13.79□□□□□ -0.2
HDDC2-206ENST00000608461 PDLIM5Q96HC4 596 aaKnown RBP13.79□□□□□ -0.2
HDDC2-206ENST00000608461 NAF1Q96HR8 494 aaKnown RBP13.79□□□□□ -0.2
HDDC2-206ENST00000608461 VPS39Q96JC1 886 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 NDNQ99608 321 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 CPNE1Q99829 537 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ULBP3Q9BZM4 244 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 RHOJQ9H4E5 214 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 SPHK1Q9NYA1 384 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 TXNDC16Q9P2K2 825 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 SERTAD3Q9UJW9 196 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 KLK4Q9Y5K2 254 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 SDK2Q58EX2 2172 aa13.79□□□□□ -0.2
HDDC2-206ENST00000608461 ITPR1Q14643 2758 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 TCRBV9S1A1TA0A576 114 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 FAM159BA6NKW6 160 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 ARHGEF33A8MVX0 844 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 PRICKLE3O43900 615 aaPredicted RBP13.78□□□□□ -0.2
HDDC2-206ENST00000608461 RAD1O60671 282 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CYP2A7P20853 494 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 MCM3P25205 808 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
HDDC2-206ENST00000608461 STX2P32856 288 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CDKN2DP55273 166 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 VAC14Q08AM6 782 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 NAB1Q13506 487 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CUL1Q13616 776 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 TRADDQ15628 312 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 MANEAQ5SRI9 462 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 RBM20Q5T481 1227 aaKnown RBP13.78□□□□□ -0.2
HDDC2-206ENST00000608461 PAQR3Q6TCH7 311 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CCDC81Q6ZN84 652 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CCDC25Q86WR0 208 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CPNE9Q8IYJ1 553 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CACNA2D3Q8IZS8 1091 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 MYO1HQ8N1T3 1032 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 IL22RA1Q8N6P7 574 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 GPATCH11Q8N954 259 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 C19orf47Q8N9M1 422 aaKnown RBP13.78□□□□□ -0.2
HDDC2-206ENST00000608461 LMNTD1Q8N9Z9 388 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 NOA1Q8NC60 698 aaKnown RBP13.78□□□□□ -0.2
HDDC2-206ENST00000608461 MCOLN3Q8TDD5 553 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 SMPDL3AQ92484 453 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 MCMBPQ9BTE3 642 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 SLC12A9Q9BXP2 914 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 PRORYQ9H606 182 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 POPDC3Q9HBV1 291 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 LRRC4CQ9HCJ2 640 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 PLAGL1Q9UM63 463 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 CELSR3Q9NYQ7 3312 aa13.78□□□□□ -0.2
HDDC2-206ENST00000608461 ESYT3A0FGR9 886 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 K7ENP7 123 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 HBQ1P09105 142 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 CCNYL3P0C7X3 344 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 PEBP1P30086 187 aaKnown RBP13.77□□□□□ -0.21
HDDC2-206ENST00000608461 BDKRB1P46663 353 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 CACNA1BQ00975 2339 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 POU4F1Q01851 419 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 KCNAB1Q14722 419 aa13.77□□□□□ -0.21
HDDC2-206ENST00000608461 SF1Q15637 639 aaKnown RBP13.77□□□□□ -0.21
HDDC2-206ENST00000608461 COL28A1Q2UY09 1125 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms