RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 PAMP19021 973 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 ARNTP27540 789 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 CSE1LP55060 971 aaKnown RBP18.59■□□□□ 0.57
SGMS1-208ENST00000608287 IL10RAQ13651 578 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 PTK6Q13882 451 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 VWA5B1Q5TIE3 1220 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 ARMC3Q5W041 872 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 PTRHD1Q6GMV3 140 aaKnown RBP18.59■□□□□ 0.57
SGMS1-208ENST00000608287 MRNIPQ6NTE8 343 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 ARMC6Q6NXE6 501 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 KLHL7Q8IXQ5 586 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 NAT8LQ8N9F0 302 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 OR4E2Q8NGC2 313 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 TM9SF4Q92544 642 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 TRIM56Q9BRZ2 755 aaKnown RBP18.59■□□□□ 0.57
SGMS1-208ENST00000608287 MVB12BQ9H7P6 319 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 ASF1BQ9NVP2 202 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 PCYOX1Q9UHG3 505 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 B3GNT3Q9Y2A9 372 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 CSMD1Q96PZ7 3565 aa18.59■□□□□ 0.57
SGMS1-208ENST00000608287 UBA6A0AVT1 1052 aaPredicted RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 SLC5A10A0PJK1 596 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 MAGEB16A2A368 324 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 IQCF5A8MTL0 148 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 ITGA3P26006 1051 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 PAFAH1B1P43034 410 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 ARL4DP49703 201 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 PLOD1Q02809 727 aaPredicted RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 PRKG2Q13237 762 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 DNTTIP2Q5QJE6 756 aaKnown RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 KIAA0930Q6ICG6 404 aaPredicted RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 PWWP2BQ6NUJ5 590 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 SDCCAG8Q86SQ7 713 aaPredicted RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 KMT5CQ86Y97 462 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 OR8K5Q8NH50 307 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 LKAAEAR1Q8TD35 194 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 LCN9Q8WX39 176 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 ZNF669Q96BR6 464 aaPredicted RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 C19orf60Q96EN9 201 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 HGH1Q9BTY7 390 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 NUDT9Q9BW91 350 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 CARD6Q9BX69 1037 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 ILKAPQ9H0C8 392 aaPredicted RBP18.58■□□□□ 0.56
SGMS1-208ENST00000608287 SRMSQ9H3Y6 488 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 ASF1AQ9Y294 204 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 POLEQ07864 2286 aa18.58■□□□□ 0.56
SGMS1-208ENST00000608287 IGHV5-51A0A0C4DH38 117 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 FAM237BA0A1B0GVD1 139 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 PFDN6O15212 129 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 POLR2CP19387 275 aaPredicted RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 CCR7P32248 378 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 ARCN1P48444 511 aaKnown RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 EIF3BP55884 814 aaKnown RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 RPS18P62269 152 aaKnown RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 HSPA14Q0VDF9 509 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 PRKAA1Q13131 559 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 DHX34Q14147 1143 aaKnown RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 RNASEH2BQ5TBB1 312 aaKnown RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 MCEMP1Q8IX19 187 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 KRT222Q8N1A0 295 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 C17orf53Q8N3J3 647 aaPredicted RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 ST6GALNAC3Q8NDV1 305 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 OR52E1Q8NGJ3 308 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 SLCO2A1Q92959 643 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 MR1Q95460 341 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 RNF31Q96EP0 1072 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 MAP3K3Q99759 626 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 GNPTGQ9UJJ9 305 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 COPG1Q9Y678 874 aaKnown RBP18.57■□□□□ 0.56
SGMS1-208ENST00000608287 MAD1L1Q9Y6D9 718 aa18.57■□□□□ 0.56
SGMS1-208ENST00000608287 BHMG1C9JSJ3 638 aaPredicted RBP18.56■□□□□ 0.56
SGMS1-208ENST00000608287 DNALI1O14645 258 aaPredicted RBP18.56■□□□□ 0.56
SGMS1-208ENST00000608287 FANCGO15287 622 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 IPO13O94829 963 aaKnown RBP18.56■□□□□ 0.56
SGMS1-208ENST00000608287 RAB40ALP0C0E4 278 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 ACADLP28330 430 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 DR1Q01658 176 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 ANKRD20A4Q4UJ75 823 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 PCGF5Q86SE9 256 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 LRRC6Q86X45 466 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 CISD2Q8N5K1 135 aaKnown RBP18.56■□□□□ 0.56
SGMS1-208ENST00000608287 OR5AR1Q8NGP9 310 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 ADAMTS17Q8TE56 1095 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 ASZ1Q8WWH4 475 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 SLC41A2Q96JW4 573 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 RUNDC3BQ96NL0 473 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 CD180Q99467 661 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 P2RY12Q9H244 342 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 TFB2MQ9H5Q4 396 aaKnown RBP18.56■□□□□ 0.56
SGMS1-208ENST00000608287 IL1RAPL1Q9NZN1 696 aa18.56■□□□□ 0.56
SGMS1-208ENST00000608287 GSAPA4D1B5 854 aa18.55■□□□□ 0.56
SGMS1-208ENST00000608287 TLCD2A6NGC4 264 aa18.55■□□□□ 0.56
SGMS1-208ENST00000608287 IGHEP01854 428 aa18.55■□□□□ 0.56
SGMS1-208ENST00000608287 APOA4P06727 396 aa18.55■□□□□ 0.56
SGMS1-208ENST00000608287 RPS3P23396 243 aaKnown RBP eCLIP18.55■□□□□ 0.56
SGMS1-208ENST00000608287 MAGEA3P43357 314 aa18.55■□□□□ 0.56
SGMS1-208ENST00000608287 THOC5Q13769 683 aaKnown RBP18.55■□□□□ 0.56
SGMS1-208ENST00000608287 TMED2Q15363 201 aa18.55■□□□□ 0.56
SGMS1-208ENST00000608287 ZRSR2Q15696 482 aaKnown RBP18.55■□□□□ 0.56
SGMS1-208ENST00000608287 TYSND1Q2T9J0 566 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms