RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 LINC00696Q6ZRV3 163 aa15.19■□□□□ 0.02
HDDC2-203ENST00000608284 CHST11Q9NPF2 352 aa15.19■□□□□ 0.02
HDDC2-203ENST00000608284 LUC7LQ9NQ29 371 aaKnown RBP15.19■□□□□ 0.02
HDDC2-203ENST00000608284 CCL22O00626 93 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 DSCR3O14972 297 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 KCNN4O15554 427 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 CNOT3O75175 753 aaKnown RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 PRF1P14222 555 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 CDKN1CP49918 316 aaPredicted RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 OTUD4Q01804 1114 aaKnown RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 OCA2Q04671 838 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 MFAP5Q13361 173 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 TCEAL1Q15170 157 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 NKG7Q16617 165 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 TTC23LQ6PF05 361 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 KIRREL2Q6UWL6 708 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 BBS12Q6ZW61 710 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 DNAJC1Q96KC8 554 aaKnown RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 TSSK1BQ9BXA7 367 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 SOX17Q9H6I2 414 aaPredicted RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 ARNT2Q9HBZ2 717 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 CUTCQ9NTM9 273 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 NLE1Q9NVX2 485 aaPredicted RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 CSAG2Q9Y5P2 127 aa15.18■□□□□ 0.02
HDDC2-203ENST00000608284 KLF2Q9Y5W3 355 aaPredicted RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 ANKRD17O75179 2603 aaKnown RBP15.18■□□□□ 0.02
HDDC2-203ENST00000608284 TRBV5-4A0A0C4DH59 114 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 H7C0S8 307 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 E2F3O00716 465 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 SOCS6O14544 535 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 HCRTR1O43613 425 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 ALOX12BO75342 701 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 USP1O94782 785 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 GAS8O95995 478 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 POU3F2P20265 443 aaPredicted RBP15.17■□□□□ 0.02
HDDC2-203ENST00000608284 ACADLP28330 430 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 RAB28P51157 221 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 FOXL2P58012 376 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 EIF3EP60228 445 aaKnown RBP15.17■□□□□ 0.02
HDDC2-203ENST00000608284 COPS2P61201 443 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 ITIH4Q14624 930 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 ZNF658BQ4V348 819 aaPredicted RBP15.17■□□□□ 0.02
HDDC2-203ENST00000608284 DNAJC21Q5F1R6 531 aaKnown RBP15.17■□□□□ 0.02
HDDC2-203ENST00000608284 VWA2Q5GFL6 755 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 TMEM207Q6UWW9 146 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 GFRALQ6UXV0 394 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 SHISA6Q6ZSJ9 500 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 GDF7Q7Z4P5 450 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 KBTBD2Q8IY47 623 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 SUN3Q8TAQ9 357 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 STYXQ8WUJ0 223 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 RELTQ969Z4 430 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 CRB3Q9BUF7 120 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 SLC26A1Q9H2B4 701 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 C10orf88Q9H8K7 445 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 SLC39A10Q9ULF5 831 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 PLAGL1Q9UM63 463 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 HS3ST3B1Q9Y662 390 aa15.17■□□□□ 0.02
HDDC2-203ENST00000608284 CSMD1Q96PZ7 3565 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 TRAV17A0A0B4J275 112 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 MAP2K7O14733 419 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 ONECUT2O95948 504 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 S1PR4O95977 384 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 HPP00738 406 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CTSBP07858 339 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 COX6B1P14854 86 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 ACPPP15309 386 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 MAGP20916 626 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CXCR2P25025 360 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 PTGER4P35408 488 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 PPARGP37231 505 aaPredicted RBP15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CASP6P55212 293 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 RBPJQ06330 500 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 OLIG2Q13516 323 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 SPARCL1Q14515 664 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 SF1Q15637 639 aaKnown RBP15.16■□□□□ 0.02
HDDC2-203ENST00000608284 INAQ16352 499 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 DBN1Q16643 649 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.16■□□□□ 0.02
HDDC2-203ENST00000608284 RAB42Q8N4Z0 105 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 GSDMBQ8TAX9 411 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CDKN2AIPNLQ96HQ2 116 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 SPATA13Q96N96 652 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CHP1Q99653 195 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 SLX1AQ9BQ83 275 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 SELENOSQ9BQE4 189 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.16■□□□□ 0.02
HDDC2-203ENST00000608284 SLC22A11Q9NSA0 550 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 ABHD10Q9NUJ1 306 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 POLQO75417 2590 aa15.16■□□□□ 0.02
HDDC2-203ENST00000608284 CNTRLQ7Z7A1 2325 aa15.15■□□□□ 0.02
HDDC2-203ENST00000608284 TRGV8A0A0C4DH27 118 aa15.15■□□□□ 0.02
HDDC2-203ENST00000608284 SYCE3A1L190 88 aa15.15■□□□□ 0.02
HDDC2-203ENST00000608284 PSMD3O43242 534 aa15.15■□□□□ 0.02
HDDC2-203ENST00000608284 SRPX2O60687 465 aaPredicted RBP15.15■□□□□ 0.02
HDDC2-203ENST00000608284 FKBP9O95302 570 aa15.15■□□□□ 0.02
HDDC2-203ENST00000608284 CRYABP02511 175 aaKnown RBP15.15■□□□□ 0.02
HDDC2-203ENST00000608284 RBP3P10745 1247 aa15.15■□□□□ 0.02
HDDC2-203ENST00000608284 FDXRP22570 491 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms