RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
CTSA-219ENST00000607841 PIKFYVEQ9Y2I7 2098 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 RP1P56715 2156 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 B4E171 279 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PHGDHO43175 533 aaKnown RBP13.79□□□□□ -0.2
CTSA-219ENST00000607841 KIF1CO43896 1103 aaKnown RBP13.79□□□□□ -0.2
CTSA-219ENST00000607841 KRT37O76014 449 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 FKBP9O95302 570 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 ZBTB11O95625 1053 aaPredicted RBP13.79□□□□□ -0.2
CTSA-219ENST00000607841 CCDC166P0CW27 439 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 TYK2P29597 1187 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 TSPAN7P41732 249 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 SEPHS1P49903 392 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 SERPINB8P50452 374 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PNLIPRP1P54315 467 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 AP1S2P56377 157 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PPP1CAP62136 330 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 BMPR2Q13873 1038 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 TMTC4Q5T4D3 741 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 TMEM164Q5U3C3 297 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 FBXO38Q6PIJ6 1188 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 IGF2-ASQ6U949 168 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 SPESP1Q6UW49 350 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 TBC1D1Q86TI0 1168 aaPredicted RBP13.79□□□□□ -0.2
CTSA-219ENST00000607841 FAM129CQ86XR2 697 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 ANKRD49Q8WVL7 239 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 SMPDL3AQ92484 453 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 OR2A14Q96R47 310 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 NRTNQ99748 197 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PITPNM3Q9BZ71 974 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 DERL2Q9GZP9 239 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 TWSG1Q9GZX9 223 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PPCSQ9HAB8 311 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 SPHK1Q9NYA1 384 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 CTNNAL1Q9UBT7 734 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PISDQ9UG56 409 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 ADAMTS6Q9UKP5 1117 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 PDE10AQ9Y233 779 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 ACOT9Q9Y305 439 aa13.79□□□□□ -0.2
CTSA-219ENST00000607841 A0A087X1B8 175 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 IGHV5-51A0A0C4DH38 117 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 EFCAB7A8K855 629 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 DXOO77932 396 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 TNFSF15O95150 251 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 WISP3O95389 354 aaPredicted RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 SLC16A8O95907 504 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 ERGP11308 486 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 UGT2B7P16662 529 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 NELFEP18615 380 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 RAB15P59190 212 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 HSD11B2P80365 405 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 SF1Q15637 639 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 SLC5A12Q1EHB4 618 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 TAF1BQ53T94 588 aaPredicted RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 FRA10AC1Q70Z53 315 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 CMC1Q7Z7K0 106 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 ADAMTSL2Q86TH1 951 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 SPNS2Q8IVW8 549 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 SYTL1Q8IYJ3 562 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 C2orf73Q8N5S3 287 aaPredicted RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 DENND1AQ8TEH3 1009 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 AENQ8WTP8 325 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 DCAKDQ8WVC6 231 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 ATL1Q8WXF7 558 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 GATA6Q92908 595 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 CAVIN3Q969G5 261 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 MTBPQ96DY7 904 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 SLC41A2Q96JW4 573 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 UBXN10Q96LJ8 280 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 SLC46A1Q96NT5 459 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 DHRS4Q9BTZ2 278 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 B3GNT4Q9C0J1 378 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 EPB41L4BQ9H329 900 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 CCDC86Q9H6F5 360 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 SNX15Q9NRS6 342 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 THSD1Q9NS62 852 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 INTS7Q9NVH2 962 aaKnown RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 ARL15Q9NXU5 204 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.78□□□□□ -0.2
CTSA-219ENST00000607841 RAB21Q9UL25 225 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 PCDHB11Q9Y5F2 797 aa13.78□□□□□ -0.2
CTSA-219ENST00000607841 A0A096LPK6 155 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 A0A0J9YY10 115 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 IQANK1A0A1B0GTG1 560 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 HMX2A2RU54 273 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 SLC9B1P1A6NJY1 282 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 AGRPO00253 132 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 CDC7O00311 574 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 C2P06681 752 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 SNRPAP09012 282 aaKnown RBP13.77□□□□□ -0.21
CTSA-219ENST00000607841 SLC35E2BP0CK96 405 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 FGF3P11487 239 aaPredicted RBP13.77□□□□□ -0.21
CTSA-219ENST00000607841 CCL4P13236 92 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 HGFP14210 728 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 RPA3P35244 121 aaPredicted RBP13.77□□□□□ -0.21
CTSA-219ENST00000607841 MAPK10P53779 464 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 MC2RQ01718 297 aa13.77□□□□□ -0.21
CTSA-219ENST00000607841 ACY1Q03154 408 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms