RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CFAP36Q96G28 342 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 NRTNQ99748 197 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 CTRCQ99895 268 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 XKR8Q9H6D3 395 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 PDE7BQ9NP56 450 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 MOCS1Q9NZB8 636 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 UTP20O75691 2785 aaKnown RBP15.65■□□□□ 0.1
LSM4-206ENST00000600289 AHCTF1Q8WYP5 2266 aa15.65■□□□□ 0.1
LSM4-206ENST00000600289 VPS26AO75436 327 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 PSIP1O75475 530 aaKnown RBP15.64■□□□□ 0.09
LSM4-206ENST00000600289 MPC1LP0DKB6 136 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 UGT2B7P16662 529 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 CDH3P22223 829 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 GABRB3P28472 473 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 CARSP49589 748 aaKnown RBP15.64■□□□□ 0.09
LSM4-206ENST00000600289 ARL4DP49703 201 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 ATP1A2P50993 1020 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 TUBB4BP68371 445 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 FOXM1Q08050 763 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 TUBB3Q13509 450 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 FASTKD3Q14CZ7 662 aaKnown RBP15.64■□□□□ 0.09
LSM4-206ENST00000600289 PCM1Q15154 2024 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 SLC5A12Q1EHB4 618 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 ACSBG2Q5FVE4 666 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 TMTC4Q5T4D3 741 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 LRRC8EQ6NSJ5 796 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 TRMT10BQ6PF06 316 aaKnown RBP15.64■□□□□ 0.09
LSM4-206ENST00000600289 PPP1R3BQ86XI6 285 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 ANKMY2Q8IV38 441 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 FBXO15Q8NCQ5 510 aaPredicted RBP15.64■□□□□ 0.09
LSM4-206ENST00000600289 CD200R1Q8TD46 325 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 INPP5DQ92835 1189 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 NKD1Q969G9 470 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 SLC22A18Q96BI1 424 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 TRAPPC9Q96Q05 1148 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 OR2A14Q96R47 310 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 CCNL2Q96S94 520 aaPredicted RBP15.64■□□□□ 0.09
LSM4-206ENST00000600289 SLC30A3Q99726 388 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 SPATA7Q9P0W8 599 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 NFS1Q9Y697 457 aa15.64■□□□□ 0.09
LSM4-206ENST00000600289 LRRK2Q5S007 2527 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 TERTO14746 1132 aaKnown RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 STK17BO94768 372 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 FKBP9O95302 570 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 AHSGP02765 367 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 F7P08709 466 aaPredicted RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 EBLN1P0CF75 366 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 ERGP11308 486 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 FOLR1P15328 257 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 ST6GAL1P15907 406 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 MAP4P27816 1152 aaKnown RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 PEBP1P30086 187 aaKnown RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 SKIV2L2P42285 1042 aaKnown RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 MGAT5Q09328 741 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 ILF2Q12905 390 aaKnown RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 TGIF1Q15583 401 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 KLHL38Q2WGJ6 581 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 HP1BP3Q5SSJ5 553 aaPredicted RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 UGT3A1Q6NUS8 523 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 C8orf74Q6P047 294 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 CYS1Q717R9 158 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 SLC26A11Q86WA9 606 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 ZBED8Q8IZ13 594 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 NLGN4XQ8N0W4 816 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 MMGT1Q8N4V1 131 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 RAB42Q8N4Z0 105 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 LINC01555Q8NAE3 123 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 NLGN4YQ8NFZ3 816 aaPredicted RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 CFAP61Q8NHU2 1237 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 ZNF501Q96CX3 271 aaPredicted RBP15.63■□□□□ 0.09
LSM4-206ENST00000600289 PPM1MQ96MI6 270 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 GPR21Q99679 349 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 FAM114A2Q9NRY5 505 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 FGF21Q9NSA1 209 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 NSMCE4AQ9NXX6 385 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 SPHK1Q9NYA1 384 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 ANKMY1Q9P2S6 941 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 RARRES3Q9UL19 164 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 PLAGL1Q9UM63 463 aa15.63■□□□□ 0.09
LSM4-206ENST00000600289 A0A0J9YY10 115 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 SLC9B1P1A6NJY1 282 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 K7ENP7 123 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 MYO1CO00159 1063 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 PRICKLE3O43900 615 aaPredicted RBP15.62■□□□□ 0.09
LSM4-206ENST00000600289 RAD1O60671 282 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 SPAG6O75602 509 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 GSTA2P09210 222 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 TIAL1Q01085 375 aaKnown RBP eCLIP15.62■□□□□ 0.09
LSM4-206ENST00000600289 VAC14Q08AM6 782 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 KCNAB1Q14722 419 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 INO80CQ6PI98 192 aaPredicted RBP15.62■□□□□ 0.09
LSM4-206ENST00000600289 ZDHHC24Q6UX98 284 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 MNS1Q8NEH6 495 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 FBXO25Q8TCJ0 367 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 DENND1AQ8TEH3 1009 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 SKA2Q8WVK7 121 aaPredicted RBP15.62■□□□□ 0.09
LSM4-206ENST00000600289 FAM136AQ96C01 138 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 FAM129AQ9BZQ8 928 aa15.62■□□□□ 0.09
LSM4-206ENST00000600289 PPANQ9NQ55 473 aaKnown RBP15.62■□□□□ 0.09
LSM4-206ENST00000600289 TAS2R13Q9NYV9 303 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms