RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 COL8A1P27658 744 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 HMGCLP35914 325 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 CBX1P83916 185 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 EIF2S3LQ2VIR3 472 aaKnown RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 TUBB8Q3ZCM7 444 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 SPANXN3Q5MJ09 141 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 GPRC6AQ5T6X5 926 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 LGSNQ5TDP6 509 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 STEAP4Q687X5 459 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 TDRPQ86YL5 185 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 IGDCC3Q8IVU1 814 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 MPP5Q8N3R9 675 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 D2HGDHQ8N465 521 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 PPHLN1Q8NEY8 458 aaKnown RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 MR1Q95460 341 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 ARL8AQ96BM9 186 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 ZNF501Q96CX3 271 aaPredicted RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 ZNF514Q96K75 400 aaPredicted RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 SLC25A23Q9BV35 468 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 WWP1Q9H0M0 922 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 ING2Q9H160 280 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 PLAC1Q9HBJ0 212 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 RAD18Q9NS91 495 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 IMP3Q9NV31 184 aaKnown RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 PIH1D1Q9NWS0 290 aaKnown RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 VPS4AQ9UN37 437 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 NOVA2Q9UNW9 492 aaKnown RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 FARSAQ9Y285 508 aaKnown RBP13.31□□□□□ -0.28
IRF3-225ENST00000600022 MAP4K5Q9Y4K4 846 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 SHANK1Q9Y566 2161 aa13.31□□□□□ -0.28
IRF3-225ENST00000600022 A1L4Q6 167 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 OR6C74A6NCV1 312 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 OR5K3A6NET4 321 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 SGTAO43765 313 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 SCRG1O75711 98 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 SORBS2O94875 1100 aaKnown RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 MT-ND3P03897 115 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 HALP42357 657 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 KPNA2P52292 529 aaKnown RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 GPX6P59796 221 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 DMPKQ09013 629 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 MRPL49Q13405 166 aaKnown RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 MSLNQ13421 630 aaPredicted RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 NAB1Q13506 487 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 PLCL1Q15111 1095 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 RASA2Q15283 850 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 TTMPQ5BVD1 217 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 PLEKHS1Q5SXH7 462 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 METRNLQ641Q3 311 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 ZNF517Q6ZMY9 492 aaPredicted RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 TMEM151BQ8IW70 566 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 CTAGE3PQ8IX95 158 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 RBM12BQ8IXT5 1001 aaKnown RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 Q8NA96 180 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 ADAMTS17Q8TE56 1095 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 RANBP9Q96S59 729 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 GPR87Q9BY21 358 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 MRM3Q9HC36 420 aaKnown RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 PPANQ9NQ55 473 aaKnown RBP13.3□□□□□ -0.28
IRF3-225ENST00000600022 SENP1Q9P0U3 644 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 TXNDC16Q9P2K2 825 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 LGALS13Q9UHV8 139 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 SOX13Q9UN79 622 aa13.3□□□□□ -0.28
IRF3-225ENST00000600022 IQANK1A0A1B0GTG1 560 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 FAM237BA0A1B0GVD1 139 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 TCRBV9S1A1TA0A576 114 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 UBA6A0AVT1 1052 aaPredicted RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 SLC9B1P1A6NJY1 282 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 A6NL46 340 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 TCP11X1B4DZS4 312 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 CAPN1P07384 714 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 MTHFD1P11586 935 aaKnown RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 KRT15P19012 456 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 PAMP19021 973 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 POLR2CP19387 275 aaPredicted RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 HPDP32754 393 aaPredicted RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 PGDP52209 483 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 ITGA1P56199 1179 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 MAGOHP61326 146 aaKnown RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 RPS15P62841 145 aaKnown RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 CRADDP78560 199 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 HSD11B2P80365 405 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 ABRQ12979 859 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 RAPSNQ13702 412 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 GTF2H3Q13889 308 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 FRG1Q14331 258 aaKnown RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 TMED2Q15363 201 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 INPP5JQ15735 1006 aaPredicted RBP13.29□□□□□ -0.28
IRF3-225ENST00000600022 PCID2Q5JVF3 399 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 FHL5Q5TD97 284 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 ZNF449Q6P9G9 518 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 UNC5AQ6ZN44 842 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 CYS1Q717R9 158 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 LRRC6Q86X45 466 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 TMEM126BQ8IUX1 230 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 GALNT11Q8NCW6 608 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 FDCSPQ8NFU4 85 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 BLOC1S5Q8TDH9 187 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
IRF3-225ENST00000600022 FCRL4Q96PJ5 515 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms