RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 ZSCAN5DPP0CG00 497 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 ACADLP28330 430 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 GLRBP48167 497 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 PLOD1Q02809 727 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CACNG1Q06432 222 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 AIMP2Q13155 320 aaKnown RBP12.05□□□□□ -0.48
TRIM28-212ENST00000597995 RPS6KA1Q15418 735 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 SLC5A12Q1EHB4 618 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CCDC38Q502W7 563 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 TAS2R42Q7RTR8 314 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 PPP1R32Q7Z5V6 425 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CUZD1Q86UP6 607 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 TRIM73Q86UV7 250 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 SLC34A3Q8N130 599 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 DNAJC22Q8N4W6 341 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CLDN19Q8N6F1 224 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 ZNF655Q8N720 491 aaPredicted RBP12.05□□□□□ -0.48
TRIM28-212ENST00000597995 ST6GALNAC3Q8NDV1 305 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 OR5AR1Q8NGP9 310 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 FLVCR1-AS1Q8TAF5 88 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 DENND1AQ8TEH3 1009 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 COG1Q8WTW3 980 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 STYXQ8WUJ0 223 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 UBE2Q2Q8WVN8 375 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 INPP5DQ92835 1189 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 NDC1Q9BTX1 674 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 SPHK1Q9NYA1 384 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 DHCR7Q9UBM7 475 aaKnown RBP12.05□□□□□ -0.48
TRIM28-212ENST00000597995 PLCL2Q9UPR0 1127 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CDYLQ9Y232 598 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 ASF1AQ9Y294 204 aa12.05□□□□□ -0.48
TRIM28-212ENST00000597995 MDC1Q14676 2089 aaKnown RBP12.05□□□□□ -0.48
TRIM28-212ENST00000597995 CNTRLQ7Z7A1 2325 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 KDM1AO60341 852 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 SUN1O94901 812 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 ONECUT2O95948 504 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 FTH1P02794 183 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 CCDC175P0C221 793 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 TPBGLP0DKB5 382 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 MMP11P24347 488 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 NSG1P42857 185 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 ITIH4Q14624 930 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 KIR2DS3Q14952 304 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 DBN1Q16643 649 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 DEFB110Q30KQ9 67 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 IGFL2Q6UWQ7 119 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 OR5K2Q8NHB8 316 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 PPP4R1Q8TF05 950 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 DLG3Q92796 817 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 FKBP10Q96AY3 582 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 ZNF778Q96MU6 729 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 WDR77Q9BQA1 342 aaPredicted RBP12.04□□□□□ -0.48
TRIM28-212ENST00000597995 FRMD8P1Q9BZ68 369 aaPredicted RBP12.04□□□□□ -0.48
TRIM28-212ENST00000597995 SLC2A6Q9UGQ3 507 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 ZNF148Q9UQR1 794 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 NTNG1Q9Y2I2 539 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 PRSS21Q9Y6M0 314 aa12.04□□□□□ -0.48
TRIM28-212ENST00000597995 DIDO1Q9BTC0 2240 aaKnown RBP12.03□□□□□ -0.48
TRIM28-212ENST00000597995 PCM1Q15154 2024 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 SLC5A10A0PJK1 596 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 CCDC162PA2VCL2 907 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 BHMG1C9JSJ3 638 aaPredicted RBP12.03□□□□□ -0.48
TRIM28-212ENST00000597995 ALBP02768 609 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 PIM1P11309 404 aaPredicted RBP12.03□□□□□ -0.48
TRIM28-212ENST00000597995 FOXN2P32314 431 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 RPL22P35268 128 aaKnown RBP12.03□□□□□ -0.48
TRIM28-212ENST00000597995 FDFT1P37268 417 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 GCGRP47871 477 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 ARSFP54793 590 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 CCNG2Q16589 344 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 PRAMEF13Q5VWM6 474 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 PACS1Q6VY07 963 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 OVCH1Q7RTY7 1134 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 LINC00523Q86TU6 105 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 KCNMB4Q86W47 210 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 ZBTB20Q9HC78 741 aaPredicted RBP12.03□□□□□ -0.48
TRIM28-212ENST00000597995 RAB6BQ9NRW1 208 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 SLC22A11Q9NSA0 550 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 IRAK4Q9NWZ3 460 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 EURLQ9NYK6 297 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 SMARCAL1Q9NZC9 954 aa12.03□□□□□ -0.48
TRIM28-212ENST00000597995 DOCK10Q96BY6 2186 aa12.02□□□□□ -0.48
TRIM28-212ENST00000597995 ERI2A8K979 691 aaKnown RBP12.02□□□□□ -0.49
TRIM28-212ENST00000597995 ISM1B1AKI9 464 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 MASP2O00187 686 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 CTSBP07858 339 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 ITGA3P26006 1051 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.49
TRIM28-212ENST00000597995 CXCR5P32302 372 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 TSFMP43897 325 aaKnown RBP12.02□□□□□ -0.49
TRIM28-212ENST00000597995 KCNJ1P48048 391 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 PER3P56645 1201 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 ACVR1Q04771 509 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 CDH17Q12864 832 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 SLC9A5Q14940 896 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 DNAJC21Q5F1R6 531 aaKnown RBP12.02□□□□□ -0.49
TRIM28-212ENST00000597995 AGAP7PQ5VUJ5 663 aa12.02□□□□□ -0.49
TRIM28-212ENST00000597995 YOD1Q5VVQ6 348 aaPredicted RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms