RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 KLHL38Q2WGJ6 581 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 SOWAHCQ53LP3 525 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 RBM20Q5T481 1227 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 TEDDM1Q5T9Z0 273 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 PRAMEF17Q5VTA0 474 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 CDHR3Q6ZTQ4 885 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 MAATS1Q7Z4T9 603 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 TAX1BP1Q86VP1 789 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 C2orf73Q8N5S3 287 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 IL22RA1Q8N6P7 574 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 C19orf47Q8N9M1 422 aaKnown RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 FBXO36Q8NEA4 188 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 OR2L8Q8NGY9 312 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 OR1L3Q8NH93 324 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 SKA2Q8WVK7 121 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 TTC9Q92623 222 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 NDNQ99608 321 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 GPR21Q99679 349 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 AKIRIN1Q9H9L7 192 aaPredicted RBP10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 WHRNQ9P202 907 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 IL17BQ9UHF5 180 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 LNPEPQ9UIQ6 1025 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 CDC23Q9UJX2 597 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 DHRS7Q9Y394 339 aa10.61□□□□□ -0.71
SHKBP1-206ENST00000595523 A0A0J9YY10 115 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 A0A1W2PPV9 198 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 H3BMH7 237 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 NTRK1P04629 796 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CTSBP07858 339 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 ERGP11308 486 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 F8A1P23610 371 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 MAP4P27816 1152 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CARSP49589 748 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 PGGT1BP53609 377 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CDKN2DP55273 166 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CYP4F2P78329 520 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 ABHD18Q0P651 414 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 FRG1Q14331 258 aaKnown RBP10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CYB5D1Q6P9G0 228 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 C6orf15Q6UXA7 325 aaPredicted RBP10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CYHR1Q6ZMK1 362 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 KIAA0408Q6ZU52 694 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 NEK10Q6ZWH5 1172 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 GALNT7Q86SF2 657 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CPNE9Q8IYJ1 553 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 ESX1Q8N693 406 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 SLC38A9Q8NBW4 561 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 GSDMBQ8TAX9 411 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 HMGCLL1Q8TB92 370 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 RAD51AP1Q96B01 352 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 FCRL4Q96PJ5 515 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 SLC12A9Q9BXP2 914 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 CCDC68Q9H2F9 335 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 MOCS1Q9NZB8 636 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 KLHL42Q9P2K6 505 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 KLHL20Q9Y2M5 609 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 PSAT1Q9Y617 370 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 COMMD10Q9Y6G5 202 aa10.6□□□□□ -0.71
SHKBP1-206ENST00000595523 NUP210LQ5VU65 1888 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 ISM1B1AKI9 464 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 TMEM150CB9EJG8 249 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 MYO1CO00159 1063 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 KDM1AO60341 852 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 SCRG1O75711 98 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 URI1O94763 535 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 MPC1LP0DKB6 136 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 MAGP20916 626 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 MCM3P25205 808 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 PSMB5P28074 263 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 CCNFP41002 786 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 YBX1P67809 324 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 FASTKQ14296 549 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 CYP2A13Q16696 494 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 DEFB110Q30KQ9 67 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 TTLL9Q3SXZ7 439 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 TMTC4Q5T4D3 741 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 ZDHHC24Q6UX98 284 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 PIWIL4Q7Z3Z4 852 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 BPHLQ86WA6 291 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 ZBED8Q8IZ13 594 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 BBOF1Q8ND07 529 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 OR8K5Q8NH50 307 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 ASB11Q8WXH4 323 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 INPP5DQ92835 1189 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 TCTN2Q96GX1 697 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 FOPNLQ96NB1 174 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 UBL7Q96S82 380 aaPredicted RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 RUFY1Q96T51 708 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 CHRNA10Q9GZZ6 450 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 PPANQ9NQ55 473 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 SMYD2Q9NRG4 433 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 MRPS18BQ9Y676 258 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 PRRC2CQ9Y520 2896 aaKnown RBP10.59□□□□□ -0.71
SHKBP1-206ENST00000595523 PCSK5Q92824 1860 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 ESYT3A0FGR9 886 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 GFYI3L273 518 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 NDC80O14777 642 aa10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 ATXN7O15265 892 aaPredicted RBP10.58□□□□□ -0.72
SHKBP1-206ENST00000595523 NRP2O60462 931 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms