RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 MAP3K3Q99759 626 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 RAB11FIP5Q9BXF6 653 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 UNKQ9C0B0 810 aaKnown RBP9.62□□□□□ -0.87
TPM4-216ENST00000592822 STRADBQ9C0K7 418 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 DERL2Q9GZP9 239 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 PARVBQ9HBI1 364 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 ACTR10Q9NZ32 417 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 SPATA7Q9P0W8 599 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.62□□□□□ -0.87
TPM4-216ENST00000592822 SEMA5BQ9P283 1151 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 ANGPTL2Q9UKU9 493 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 SATB2Q9UPW6 733 aa9.62□□□□□ -0.87
TPM4-216ENST00000592822 IGHV5-51A0A0C4DH38 117 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 A0A1W2PPV9 198 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TRABD2BA6NFA1 517 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TLCD2A6NGC4 264 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 ISM1B1AKI9 464 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TRIM49D1C9J1S8 452 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 HGSO14964 777 aaPredicted RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 TOX3O15405 576 aaPredicted RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 PRICKLE3O43900 615 aaPredicted RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 RASSF9O75901 435 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 KRT38O76015 456 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 MPOP05164 745 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 HGFP14210 728 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 CD1DP15813 335 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 CYP2A7P20853 494 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 HSD17B2P37059 387 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 SERPINB8P50452 374 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 IRF9Q00978 393 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 CSHL1Q14406 222 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 KIR2DS3Q14952 304 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 ARHGAP19Q14CB8 494 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 OR4D1Q15615 310 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TSNQ15631 228 aaKnown RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 PPP1R3AQ16821 1122 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 MBOAT1Q6ZNC8 495 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TAOK1Q7L7X3 1001 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 RAB11FIP2Q7L804 512 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TRIM73Q86UV7 250 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 TAX1BP1Q86VP1 789 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 LRRC56Q8IYG6 542 aaPredicted RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 RAB42Q8N4Z0 105 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 MREGQ8N565 214 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 AGBL5Q8NDL9 886 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 WDR36Q8NI36 951 aaKnown RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 MCOLN3Q8TDD5 553 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 KCTD4Q8WVF5 259 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 KLHL6Q8WZ60 621 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 PTERQ96BW5 349 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 PRR11Q96HE9 360 aaPredicted RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 CCDC77Q9BR77 488 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 PITPNM3Q9BZ71 974 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 ZNF768Q9H5H4 540 aaKnown RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 IGSF5Q9NSI5 407 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 OCIAD1Q9NX40 245 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 CTNNAL1Q9UBT7 734 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 LNPEPQ9UIQ6 1025 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 NOVA2Q9UNW9 492 aaKnown RBP9.61□□□□□ -0.87
TPM4-216ENST00000592822 ACOT9Q9Y305 439 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 LOXL2Q9Y4K0 774 aa9.61□□□□□ -0.87
TPM4-216ENST00000592822 FREM2Q5SZK8 3169 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 A0A087X1B8 175 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 A0A096LPK6 155 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 SLC9B1P1A6NJY1 282 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 E7ENX8 843 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 PLD2O14939 933 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 RFPL1O75677 317 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 KRT37O76014 449 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 SNRPAP09012 282 aaKnown RBP9.6□□□□□ -0.87
TPM4-216ENST00000592822 ENO2P09104 434 aaPredicted RBP9.6□□□□□ -0.87
TPM4-216ENST00000592822 LTA4HP09960 611 aaKnown RBP9.6□□□□□ -0.87
TPM4-216ENST00000592822 NUDT17P0C025 328 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 FGF3P11487 239 aaPredicted RBP9.6□□□□□ -0.87
TPM4-216ENST00000592822 CCL4P13236 92 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 PVRP15151 417 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 ITIH1P19827 911 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 CDH3P22223 829 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 IMPA1P29218 277 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 TYK2P29597 1187 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 CSTF2P33240 577 aaKnown RBP eCLIP9.6□□□□□ -0.87
TPM4-216ENST00000592822 SLC26A3P40879 764 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 ETV5P41161 510 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 SLCO1A2P46721 670 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 KCNC1P48547 511 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 SEPHS1P49903 392 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 PNLIPRP1P54315 467 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 ATP6V0D1P61421 351 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 GABREP78334 506 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 TAP2Q03519 686 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 EIF3IQ13347 325 aaKnown RBP9.6□□□□□ -0.87
TPM4-216ENST00000592822 RTP5Q14D33 572 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 ZXDCQ2QGD7 858 aaPredicted RBP9.6□□□□□ -0.87
TPM4-216ENST00000592822 C3orf38Q5JPI3 329 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 LGSNQ5TDP6 509 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 SPESP1Q6UW49 350 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 SUSD1Q6UWL2 747 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 TIFABQ6ZNK6 161 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 CCDC91Q7Z6B0 441 aa9.6□□□□□ -0.87
TPM4-216ENST00000592822 TBC1D1Q86TI0 1168 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms