RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 OR2L8Q8NGY9 312 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 ATG4AQ8WYN0 398 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 FKBP10Q96AY3 582 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 PANX3Q96QZ0 392 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 MENTQ9BUN1 341 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 SPRTNQ9H040 489 aaPredicted RBP18.16■□□□□ 0.5
CCDC43-205ENST00000592333 LRRC4CQ9HCJ2 640 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 RAB6BQ9NRW1 208 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 EURLQ9NYK6 297 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 SLC2A6Q9UGQ3 507 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 ZKSCAN5Q9Y2L8 839 aa18.16■□□□□ 0.5
CCDC43-205ENST00000592333 TNRC6AQ8NDV7 1962 aaKnown RBP18.15■□□□□ 0.5
CCDC43-205ENST00000592333 TARM1B6A8C7 271 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 AOAHP28039 575 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 HSPA14Q0VDF9 509 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 MYBPC3Q14896 1274 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 TMED2Q15363 201 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 NKAIN1Q4KMZ8 207 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 TCTE1Q5JU00 501 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 SLC6A19Q695T7 634 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 TTC23LQ6PF05 361 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 TRIM73Q86UV7 250 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 RBMXL3Q8N7X1 1067 aaKnown RBP18.15■□□□□ 0.5
CCDC43-205ENST00000592333 TM9SF4Q92544 642 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 ZUFSPQ96AP4 578 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 ZNF778Q96MU6 729 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 IL22Q9GZX6 179 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 SLC26A1Q9H2B4 701 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 WDR54Q9H977 334 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 IL1RAPL1Q9NZN1 696 aa18.15■□□□□ 0.5
CCDC43-205ENST00000592333 DRG1Q9Y295 367 aaKnown RBP18.15■□□□□ 0.5
CCDC43-205ENST00000592333 PTRH2Q9Y3E5 179 aaKnown RBP18.15■□□□□ 0.5
CCDC43-205ENST00000592333 HCRTR1O43613 425 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 APRTP07741 180 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 GNLYP22749 145 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 RPS3P23396 243 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCDC43-205ENST00000592333 PEBP1P30086 187 aaKnown RBP18.14■□□□□ 0.49
CCDC43-205ENST00000592333 OTX2P32243 289 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 GRIA1P42261 906 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 CCNG2Q16589 344 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 GALNT16Q8N428 558 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 RAB42Q8N4Z0 105 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 TAB3Q8N5C8 712 aaPredicted RBP18.14■□□□□ 0.49
CCDC43-205ENST00000592333 ZNF655Q8N720 491 aaPredicted RBP18.14■□□□□ 0.49
CCDC43-205ENST00000592333 Q8NA96 180 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 LINC01555Q8NAE3 123 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 RAD51AP1Q96B01 352 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 DESI2Q9BSY9 194 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 CATSPERZQ9NTU4 200 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 KLK4Q9Y5K2 254 aa18.14■□□□□ 0.49
CCDC43-205ENST00000592333 PRRC2CQ9Y520 2896 aaKnown RBP18.13■□□□□ 0.49
CCDC43-205ENST00000592333 A0A1B0GX78 115 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 GOLGA6L6A8MZA4 724 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 RASGRF2O14827 1237 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 SRPX2O60687 465 aaPredicted RBP18.13■□□□□ 0.49
CCDC43-205ENST00000592333 AGFG2O95081 481 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 MAGP20916 626 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 NPY2RP49146 381 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 CDK16Q00536 496 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 GRB7Q14451 532 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 DEFB110Q30KQ9 67 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 FAM69BQ5VUD6 431 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 NAPRTQ6XQN6 538 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 MICALCLQ6ZW33 695 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 MCATQ8IVS2 390 aaKnown RBP18.13■□□□□ 0.49
CCDC43-205ENST00000592333 GSDMBQ8TAX9 411 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 HMGCLL1Q8TB92 370 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 MAGEC3Q8TD91 643 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 MAIP1Q8WWC4 291 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 VPS50Q96JG6 964 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 ZNF285Q96NJ3 590 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 MRM3Q9HC36 420 aaKnown RBP18.13■□□□□ 0.49
CCDC43-205ENST00000592333 ATP13A2Q9NQ11 1180 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 IRAK4Q9NWZ3 460 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 P4HTMQ9NXG6 502 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 DHCR7Q9UBM7 475 aaKnown RBP18.13■□□□□ 0.49
CCDC43-205ENST00000592333 GNPTGQ9UJJ9 305 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 NXT1Q9UKK6 140 aaKnown RBP18.13■□□□□ 0.49
CCDC43-205ENST00000592333 B3GNT3Q9Y2A9 372 aa18.13■□□□□ 0.49
CCDC43-205ENST00000592333 BLACEA4D250 179 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 A6NL46 340 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 AGPSO00116 658 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 PFDN6O15212 129 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 CD3EAPO15446 510 aaKnown RBP18.12■□□□□ 0.49
CCDC43-205ENST00000592333 DDAH2O95865 285 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 MMP11P24347 488 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 CCNFP41002 786 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 UQCRFS1P47985 274 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 AIMP2Q13155 320 aaKnown RBP18.12■□□□□ 0.49
CCDC43-205ENST00000592333 SEMA3AQ14563 771 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 GRM7Q14831 915 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 NAA25Q14CX7 972 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 CYP2A13Q16696 494 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 FAM214AQ32MH5 1076 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 MEI1Q5TIA1 1274 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 C1orf189Q5VU69 101 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 OVCH1Q7RTY7 1134 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 VRK3Q8IV63 474 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 IQCKQ8N0W5 287 aa18.12■□□□□ 0.49
CCDC43-205ENST00000592333 SSC4DQ8WTU2 575 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms