RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 ZBTB11O95625 1053 aaPredicted RBP11.13□□□□□ -0.63
VMP1-211ENST00000591315 SAT1P21673 171 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 CD9P21926 228 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 ATP5DP30049 168 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 RAB28P51157 221 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 HSD11B2P80365 405 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 TUBB3Q13509 450 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 DEFB110Q30KQ9 67 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 PWWP2BQ6NUJ5 590 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 TMEM207Q6UWW9 146 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 CEACAM20Q6UY09 585 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 MBOAT1Q6ZNC8 495 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 LRRC69Q6ZNQ3 347 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 KIAA0408Q6ZU52 694 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 C3orf62Q6ZUJ4 267 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 ZC3HC1Q86WB0 502 aaKnown RBP11.13□□□□□ -0.63
VMP1-211ENST00000591315 IFT81Q8WYA0 676 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 NKD1Q969G9 470 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 PKP4Q99569 1192 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 PITPNM3Q9BZ71 974 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 AKIRIN1Q9H9L7 192 aaPredicted RBP11.13□□□□□ -0.63
VMP1-211ENST00000591315 LRRC4CQ9HCJ2 640 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 C1GALT1Q9NS00 363 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 FGF21Q9NSA1 209 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 SOHLH2Q9NX45 425 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 OR6C2Q9NZP2 312 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 ZFATQ9P243 1243 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 TRMT6Q9UJA5 497 aaKnown RBP11.13□□□□□ -0.63
VMP1-211ENST00000591315 PILRAQ9UKJ1 303 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 ADAMTS6Q9UKP5 1117 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 BTRCQ9Y297 605 aa11.13□□□□□ -0.63
VMP1-211ENST00000591315 A0A1W2PPV9 198 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 NDC80O14777 642 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 PRICKLE3O43900 615 aaPredicted RBP11.12□□□□□ -0.63
VMP1-211ENST00000591315 RAD1O60671 282 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 VPS26AO75436 327 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 PSIP1O75475 530 aaKnown RBP11.12□□□□□ -0.63
VMP1-211ENST00000591315 SPAG6O75602 509 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 KIAA0754O94854 1291 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 TSPAN12O95859 305 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 TUBB4AP04350 444 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 NTRK1P04629 796 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 MPC1LP0DKB6 136 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 LIPCP11150 499 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 FDXRP22570 491 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 ECHS1P30084 290 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 ARL4DP49703 201 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 RAB15P59190 212 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 TAS2R39P59534 338 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 TTLL9Q3SXZ7 439 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 GALNT6Q8NCL4 622 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 PPFIBP2Q8ND30 876 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 MNS1Q8NEH6 495 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 OR2L8Q8NGY9 312 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 OR1L3Q8NH93 324 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 ASB11Q8WXH4 323 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 RAD51AP1Q96B01 352 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 LINGO1Q96FE5 620 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 MCMBPQ9BTE3 642 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 ASPSCR1Q9BZE9 553 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 KLHL42Q9P2K6 505 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 SLC39A10Q9ULF5 831 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 MTO1Q9Y2Z2 717 aaKnown RBP11.12□□□□□ -0.63
VMP1-211ENST00000591315 VWA7Q9Y334 891 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 COMMD10Q9Y6G5 202 aa11.12□□□□□ -0.63
VMP1-211ENST00000591315 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 FAM159BA6NKW6 160 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 STMND1H3BQB6 276 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 GFYI3L273 518 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 MYO1CO00159 1063 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 DLGAP3O95886 979 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 SYF2O95926 243 aaKnown RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 RPN2P04844 631 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 FGF5P12034 268 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 MAGP20916 626 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 GRIA3P42263 894 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 GABRA4P48169 554 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 CXADRP78310 365 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 CAV1Q03135 178 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 TUBB2AQ13885 445 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 ARHGAP40Q5TG30 622 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 KIAA1614Q5VZ46 1190 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 FCRL6Q6DN72 434 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 SUSD1Q6UWL2 747 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 NEK10Q6ZWH5 1172 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 UBE2R2Q712K3 238 aaPredicted RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 GALNT7Q86SF2 657 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 KMT5CQ86Y97 462 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 CEP97Q8IW35 865 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 C19orf47Q8N9M1 422 aaKnown RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 SLC38A9Q8NBW4 561 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 OR9A1PQ8NGU1 263 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 FBF1Q8TES7 1133 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 ZNF501Q96CX3 271 aaPredicted RBP11.11□□□□□ -0.63
VMP1-211ENST00000591315 FOPNLQ96NB1 174 aa11.11□□□□□ -0.63
VMP1-211ENST00000591315 RUFY1Q96T51 708 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms