RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
LIG3-213ENST00000590630 VWA7Q9Y334 891 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 HEATR5BQ9P2D3 2071 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 ATMQ13315 3056 aa11.51□□□□□ -0.57
LIG3-213ENST00000590630 SLC9B1P1A6NJY1 282 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FAM159BA6NKW6 160 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 ARHGEF33A8MVX0 844 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 GFYI3L273 518 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 MYO1CO00159 1063 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 KLK10O43240 276 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FGF5P12034 268 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FOLR1P15328 257 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FDXRP22570 491 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 MAP4P27816 1152 aaKnown RBP11.5□□□□□ -0.57
LIG3-213ENST00000590630 HSD17B2P37059 387 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 ABCG1P45844 678 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 GPX6P59796 221 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 TUBB4BP68371 445 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 TLE3Q04726 772 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 PDAP1Q13442 181 aaKnown RBP11.5□□□□□ -0.57
LIG3-213ENST00000590630 KCNAB1Q14722 419 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 ARHGAP19Q14CB8 494 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 SLC5A12Q1EHB4 618 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.5□□□□□ -0.57
LIG3-213ENST00000590630 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.5□□□□□ -0.57
LIG3-213ENST00000590630 BROXQ5VW32 411 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 PAQR3Q6TCH7 311 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 PPP1R3BQ86XI6 285 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 DTX1Q86Y01 620 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 RELL1Q8IUW5 271 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 RASGRP3Q8IV61 690 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 OR9A1PQ8NGU1 263 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 OR8K5Q8NH50 307 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FLVCR1-AS1Q8TAF5 88 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 NAF1Q96HR8 494 aaKnown RBP11.5□□□□□ -0.57
LIG3-213ENST00000590630 PPM1MQ96MI6 270 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FCRL4Q96PJ5 515 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 TRAPPC9Q96Q05 1148 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FMO2Q99518 471 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 CPNE1Q99829 537 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 MCMBPQ9BTE3 642 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 CHRNA10Q9GZZ6 450 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 RHOJQ9H4E5 214 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 SYTL2Q9HCH5 934 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 LRRC4CQ9HCJ2 640 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 SMYD2Q9NRG4 433 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 FGF21Q9NSA1 209 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 SPHK1Q9NYA1 384 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 CIDEBQ9UHD4 219 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 RARRES3Q9UL19 164 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 SEC16AO15027 2179 aa11.5□□□□□ -0.57
LIG3-213ENST00000590630 A0A0J9YY10 115 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ZNF839A8K0R7 811 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ISM1B1AKI9 464 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ZBTB14O43829 449 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 FKBP9O95302 570 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 C8GP07360 202 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 EBLN1P0CF75 366 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ERGP11308 486 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ST6GAL1P15907 406 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 PEBP1P30086 187 aaKnown RBP11.49□□□□□ -0.57
LIG3-213ENST00000590630 UCNP55089 124 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 IL2P60568 153 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 CLN3Q13286 438 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 SP140Q13342 867 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 NAB1Q13506 487 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 CYP2A13Q16696 494 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 CCSMST1Q4G0I0 132 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 FBXO38Q6PIJ6 1188 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 CYHR1Q6ZMK1 362 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 PIWIL4Q7Z3Z4 852 aaKnown RBP11.49□□□□□ -0.57
LIG3-213ENST00000590630 ZFAND4Q86XD8 727 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 MYO1HQ8N1T3 1032 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 C19orf47Q8N9M1 422 aaKnown RBP11.49□□□□□ -0.57
LIG3-213ENST00000590630 DENND1AQ8TEH3 1009 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 EEF1AKMT1Q8WVE0 214 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 IFT81Q8WYA0 676 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 TCTN2Q96GX1 697 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 VPS39Q96JC1 886 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ELMO2Q96JJ3 720 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 IL17FQ96PD4 163 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 OLFM1Q99784 485 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 ULBP3Q9BZM4 244 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 L2HGDHQ9H9P8 463 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 FANCEQ9HB96 536 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 PILRAQ9UKJ1 303 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 SSUH2Q9Y2M2 353 aa11.49□□□□□ -0.57
LIG3-213ENST00000590630 TMEM184BQ9Y519 407 aaPredicted RBP11.49□□□□□ -0.57
LIG3-213ENST00000590630 ZFYVE26Q68DK2 2539 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 FAM95CA0A1B0GW59 222 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 CXorf49A8MYA2 514 aaPredicted RBP11.48□□□□□ -0.57
LIG3-213ENST00000590630 SLC16A5O15375 505 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 PIAS1O75925 651 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 STK17BO94768 372 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 TSPAN12O95859 305 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 C1QAP02745 245 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 PVRP15151 417 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 ZNF37AP17032 561 aaPredicted RBP11.48□□□□□ -0.57
LIG3-213ENST00000590630 ITPKBP27987 946 aa11.48□□□□□ -0.57
LIG3-213ENST00000590630 PHBP35232 272 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms