RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 TMCC2O75069 709 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 MATN4O95460 622 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 C18orf21Q32NC0 220 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 FRG2Q64ET8 278 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 FRG2BQ96QU4 278 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 C1QTNF1Q9BXJ1 281 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 SEZ6LQ9BYH1 1024 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 TPK1Q9H3S4 243 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 PCTPQ9UKL6 214 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 FZD4Q9ULV1 537 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 ARFGEF1Q9Y6D6 1849 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 SAGE2PA6NJ88 616 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 SERPINB7O75635 380 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 GJB5O95377 273 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 CCND3P30281 292 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 OXTRP30559 389 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC11A1P49279 550 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 KCNAB2Q13303 367 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 TEAD4Q15561 434 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 IFI44LQ53G44 452 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 COQ5Q5HYK3 327 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 ZZZ3Q8IYH5 903 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 LILRA2Q8N149 483 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 HDAC2Q92769 488 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 PPP1R16AQ96I34 528 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 KLHL1Q9NR64 748 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 SDR39U1Q9NRG7 319 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 WBP11Q9Y2W2 641 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 CCDC182A6NF36 153 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 ZNF623O75123 536 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 ARCN1P48444 511 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 TMBIM6P55061 237 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 DUOXA1Q1HG43 343 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 PAGE3Q5JUK9 113 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 CENPSQ8N2Z9 138 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 VPS29Q9UBQ0 182 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 PHIPQ8WWQ0 1821 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 FADS2P1A8MWK0 482 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 IFNW1P05000 195 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 GKP32189 559 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 BUD31P41223 144 aaPredicted RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 GATMP50440 423 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 TXNL4AP83876 142 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 SDE2Q6IQ49 451 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 USP7Q93009 1102 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 LYVE1Q9Y5Y7 322 aa16.73■□□□□ 0.27
SMARCA4-215ENST00000590574 TCRBV3S1A0A5B6 114 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 UNCXA6NJT0 531 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TAF4O00268 1085 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 FBP2O00757 339 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 XYLBO75191 536 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 FYNP06241 537 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 HNMTP50135 292 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CREMQ03060 361 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CLIP4Q8N3C7 705 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 AP2M1Q96CW1 435 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 SLC9A8Q9Y2E8 581 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 SPACA6W5XKT8 324 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CCNB2O95067 398 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 RPLP0P05388 317 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 FGF4P08620 206 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 RING1Q06587 406 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TIGD6Q17RP2 521 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 BEND5Q7L4P6 421 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CFAP206Q8IYR0 622 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CAMKK1Q8N5S9 505 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 OR13J1Q8NGT2 312 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TEFMQ96QE5 360 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 SERHL2Q9H4I8 314 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 SERHLQ9NQF3 203 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 AASDHPPTQ9NRN7 309 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TRIM17Q9Y577 477 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 PCDHGA11Q9Y5H2 935 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CDK5RAP2Q96SN8 1893 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 ERAL1O75616 437 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CDKN1CP49918 316 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 HLCSP50747 726 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 DNAJB7Q7Z6W7 309 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CNIH3Q8TBE1 160 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 YIPF1Q9Y548 306 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CEPT1Q9Y6K0 416 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 SAP18O00422 153 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 UGT2B17O75795 530 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 ADRA1AP35348 466 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 IL12RB1P42701 662 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CSNK2BP67870 215 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 GRIK2Q13002 908 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 KLHL17Q6TDP4 642 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TRIM74Q86UV6 250 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TRIM73Q86UV7 250 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 RGL4Q8IZJ4 473 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 CDK20Q8IZL9 346 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 FNDC8Q8TC99 324 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 NT5C3BQ969T7 300 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 TUBA1CQ9BQE3 449 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 SPATA5L1Q9BVQ7 753 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 FAIM2Q9BWQ8 316 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 C11orf16Q9NQ32 467 aa16.72■□□□□ 0.27
SMARCA4-215ENST00000590574 GULP1Q9UBP9 304 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms