RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 SOCS7O14512 581 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 WBP4O75554 376 aaKnown RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 RPLP0P05388 317 aaKnown RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SUPT20HL2P0C7V6 817 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 GGT1P19440 569 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 BRCC3P46736 316 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 KRR1Q13601 381 aaKnown RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 MAD2L1BPQ15013 274 aaPredicted RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 LBX2Q6XYB7 198 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 PROKR1Q8TCW9 393 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 NETO1Q8TDF5 533 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 AKAP1Q92667 903 aaKnown RBP eCLIP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 OR5M11Q96RB7 305 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 FAM129BQ96TA1 746 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 PDGFCQ9NRA1 345 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SPATA6Q9NWH7 488 aaPredicted RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SMPD4Q9NXE4 827 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 WWP2O00308 870 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SNX4O95219 450 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 G6PDP11413 515 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SSTR2P30874 369 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 GALNT3Q14435 633 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 DLEU7Q6UYE1 221 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 LINC00299Q6ZSB3 139 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SYVN1Q86TM6 617 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 ANKRD46Q86W74 232 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 DENND1CQ8IV53 801 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SLAIN1Q8ND83 568 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 ELOVL6Q9H5J4 265 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 GALNT9Q9HCQ5 603 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SLC35C2Q9NQQ7 365 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 RAD18Q9NS91 495 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 PIGVQ9NUD9 493 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 MARCH4Q9P2E8 410 aaPredicted RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 ZMAT5Q9UDW3 170 aaKnown RBP14.84□□□□□ -0.03
CIRBP-228ENST00000590347 SLC6A14Q9UN76 642 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 PCDHB5Q9Y5E4 795 aa14.84□□□□□ -0.03
CIRBP-228ENST00000590347 TULP3O75386 442 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 CFL1P23528 166 aaKnown RBP14.83□□□□□ -0.03
CIRBP-228ENST00000590347 GZMKP49863 264 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 PTGR1Q14914 329 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 PTPRRQ15256 657 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 ZNF79Q15937 498 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 UGP2Q16851 508 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 TATDN3Q17R31 274 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 KLHL17Q6TDP4 642 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 ARSKQ6UWY0 536 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 FAM131AQ6UXB0 335 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 CCDC190Q86UF4 302 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 PHF21AQ96BD5 680 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 MCCC1Q96RQ3 725 aaPredicted RBP14.83□□□□□ -0.03
CIRBP-228ENST00000590347 UGT2B28Q9BY64 529 aa14.83□□□□□ -0.03
CIRBP-228ENST00000590347 ZNF490Q9ULM2 529 aaPredicted RBP14.83□□□□□ -0.03
CIRBP-228ENST00000590347 CLDN24A6NM45 220 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 E9PAM4 449 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 DPYSL4O14531 572 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 OR1I1O60431 355 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 KATNA1O75449 491 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 KIR2DL3P43628 341 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 PPP3CCP48454 512 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 HERVK_113P63132 956 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 CYP4F8P98187 520 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 RBBP7Q16576 425 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 TSTQ16762 297 aaKnown RBP14.83□□□□□ -0.04
CIRBP-228ENST00000590347 AGMOQ6ZNB7 445 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 OR5K1Q8NHB7 308 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 ZNF675Q8TD23 568 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 TESCQ96BS2 214 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 C12orf42Q96LP6 360 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 FRMD6Q96NE9 622 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 ERVK-6Q9BXR3 956 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 TM9SF3Q9HD45 589 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 BRD7Q9NPI1 651 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 SLC6A13Q9NSD5 602 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 SIRT5Q9NXA8 310 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 MKLN1Q9UL63 735 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 ASB1Q9Y576 335 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 PCDHGB1Q9Y5G3 927 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 LTBP3Q9NS15 1303 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 A0A087X1B8 175 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 EFCAB10A6NFE3 127 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 CXCR6O00574 342 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 ANKRD28O15084 1053 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 EEDO75530 441 aaKnown RBP14.83□□□□□ -0.04
CIRBP-228ENST00000590347 SERPINI2O75830 405 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 PIGRP01833 764 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 TPI1P60174 286 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 ADIGQ0VDE8 80 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 LAMTOR4Q0VGL1 99 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 HYAL2Q12891 473 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 CLVS2Q5SYC1 327 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 VTCN1Q7Z7D3 282 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 TLK2Q86UE8 772 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 ADHFE1Q8IWW8 467 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 PCYT2Q99447 389 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 CDT1Q9H211 546 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 FAM83DQ9H4H8 585 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 WASH6PQ9NQA3 447 aa14.83□□□□□ -0.04
CIRBP-228ENST00000590347 MAP3K20Q9NYL2 800 aaKnown RBP14.83□□□□□ -0.04
CIRBP-228ENST00000590347 NPAP1Q9NZP6 1156 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms