RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 GRB7Q14451 532 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 SLC5A12Q1EHB4 618 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 KLHL38Q2WGJ6 581 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 DEFB109BQ30KR1 87 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 TTLL9Q3SXZ7 439 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CCSMST1Q4G0I0 132 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 SPANXN3Q5MJ09 141 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 BORAQ6PGQ7 559 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 GPR135Q8IZ08 494 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 EXD3Q8N9H8 876 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 C19orf47Q8N9M1 422 aaKnown RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 OR2L8Q8NGY9 312 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CT55Q8WUE5 264 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 STARD8Q92502 1023 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 INPP5DQ92835 1189 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 SLC22A18Q96BI1 424 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CFAP36Q96G28 342 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 CATSPER2Q96P56 530 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 FAM167BQ9BTA0 163 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 NAT9Q9BTE0 207 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 ACTR5Q9H9F9 607 aaPredicted RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 PPANQ9NQ55 473 aaKnown RBP11.66□□□□□ -0.54
TPM4-212ENST00000590180 LATS2Q9NRM7 1088 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 SNX24Q9Y343 169 aa11.66□□□□□ -0.54
TPM4-212ENST00000590180 SPTA1P02549 2419 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SMAPO00193 183 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 MEN1O00255 615 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 OR2B3O76000 313 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 FAM87AP0C7U9 286 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 ATXN8OSP0DMR3 200 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 PEBP1P30086 187 aaKnown RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 ELK3P41970 407 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 CCR10P46092 362 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 CLCN7P51798 805 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 ARL4CP56559 192 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 GPS2Q13227 327 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 TSTA3Q13630 321 aaPredicted RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 CRYMQ14894 314 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 ZIC1Q15915 447 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 DEFB110Q30KQ9 67 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 ATP1A1-AS1Q5TC04 95 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 HIBCHQ6NVY1 386 aaPredicted RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 ZNF549Q6P9A3 640 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SYT10Q6XYQ8 523 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 IGDCC3Q8IVU1 814 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 LINC01555Q8NAE3 123 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SLC38A9Q8NBW4 561 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 FLVCR1-AS1Q8TAF5 88 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 MED8Q96G25 268 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SNF8Q96H20 258 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 GPR21Q99679 349 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SLC30A3Q99726 388 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 RAB11FIP5Q9BXF6 653 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 GPR87Q9BY21 358 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SEMA4CQ9C0C4 833 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 TWSG1Q9GZX9 223 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 SPRTNQ9H040 489 aaPredicted RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 CHST8Q9H2A9 424 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 INTS7Q9NVH2 962 aaKnown RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 CHMP2BQ9UQN3 213 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 FARSAQ9Y285 508 aaKnown RBP11.65□□□□□ -0.54
TPM4-212ENST00000590180 COMMD10Q9Y6G5 202 aa11.65□□□□□ -0.54
TPM4-212ENST00000590180 CDC14CA4D256 554 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 KRT87PA6NCN2 255 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 C21orf140B9A014 251 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 FANCGO15287 622 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 ZNF749O43361 778 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 VPS26AO75436 327 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 CREG1O75629 220 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 MATN4O95460 622 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 CATP04040 527 aaKnown RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 HBQ1P09105 142 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 MAGP20916 626 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 OAS2P29728 719 aaKnown RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 ATP5DP30049 168 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 GRIA3P42263 894 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 ETF1P62495 437 aaKnown RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 CDC20Q12834 499 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 CUL1Q13616 776 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 COL9A2Q14055 689 aaPredicted RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 HIF1AQ16665 826 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 FIGLAQ6QHK4 219 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 ANKMY2Q8IV38 441 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 MCATQ8IVS2 390 aaKnown RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 SPNS2Q8IVW8 549 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 ZNF843Q8N446 348 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 DNAJC22Q8N4W6 341 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 C2CD4AQ8NCU7 369 aaPredicted RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 BBOF1Q8ND07 529 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 OR9A1PQ8NGU1 263 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 RUFY1Q96T51 708 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 MIPEPQ99797 713 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 AARSD1Q9BTE6 412 aaKnown RBP11.64□□□□□ -0.55
TPM4-212ENST00000590180 MENTQ9BUN1 341 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 FAM114A2Q9NRY5 505 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 KLHL42Q9P2K6 505 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 PLCL2Q9UPR0 1127 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 DHRS7Q9Y394 339 aa11.64□□□□□ -0.55
TPM4-212ENST00000590180 FAM187AA6NFU0 413 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms