RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 SOX13Q9UN79 622 aa16.21■□□□□ 0.19
CROCCP3-203ENST00000589964 SNX7Q9UNH6 387 aa16.21■□□□□ 0.19
CROCCP3-203ENST00000589964 MED16Q9Y2X0 877 aa16.21■□□□□ 0.19
CROCCP3-203ENST00000589964 A0A1W2PPV9 198 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 A6NL46 340 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 MKRN2OSH3BPM6 223 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 QSOX1O00391 747 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 ZNF185O15231 689 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 CTSVO60911 334 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 ALOX12BO75342 701 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 C1orf105O95561 183 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 TPSB2P20231 275 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 MAGEA6P43360 314 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 RAB28P51157 221 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 GBX1Q14549 363 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 TPSAB1Q15661 275 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 SLC5A12Q1EHB4 618 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 TYSND1Q2T9J0 566 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 DNAJC21Q5F1R6 531 aaKnown RBP16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 LRRC8BQ6P9F7 803 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 CYB5D1Q6P9G0 228 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 NLRP9Q7RTR0 991 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 DCUN1D3Q8IWE4 304 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 RASGEF1CQ8N431 466 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 OTUD6BQ8N6M0 293 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 AMER2Q8N7J2 671 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 TRIM58Q8NG06 486 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 TCTN2Q96GX1 697 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 IL22Q9GZX6 179 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 ING2Q9H160 280 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 POLG2Q9UHN1 485 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 SERTAD3Q9UJW9 196 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 CRYL1Q9Y2S2 319 aa16.2■□□□□ 0.18
CROCCP3-203ENST00000589964 ZSCAN9O15535 394 aaPredicted RBP16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 NDUFS3O75489 264 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 BANF1O75531 89 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 RECKO95980 971 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 KRT14P02533 472 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 KLK3P07288 261 aaPredicted RBP16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 UMODP07911 640 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 RAB40ALP0C0E4 278 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 CD9P21926 228 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 OTX2P32243 289 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 UQCRFS1P47985 274 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 CD97P48960 835 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 NPY2RP49146 381 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 KIR2DS3Q14952 304 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 ACSBG2Q5FVE4 666 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 ZNF549Q6P9A3 640 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 DENND6AQ8IWF6 608 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 SHISA5Q8N114 240 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 SLC35F6Q8N357 371 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 METTL27Q8N6F8 245 aaPredicted RBP16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 FDCSPQ8NFU4 85 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 OR2L8Q8NGY9 312 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 ASZ1Q8WWH4 475 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 PEX13Q92968 403 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 NUDT9Q9BW91 350 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 MLXIPLQ9NP71 852 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 EURLQ9NYK6 297 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 BFARQ9NZS9 450 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 ANAPC2Q9UJX6 822 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 ZKSCAN5Q9Y2L8 839 aa16.19■□□□□ 0.18
CROCCP3-203ENST00000589964 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 ARHGEF33A8MVX0 844 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 RASGRF2O14827 1237 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 APOA4P06727 396 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 RPS3P23396 243 aaKnown RBP eCLIP16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 TTPAP49638 278 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 MLIPQ5VWP3 458 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 FRMPD2BQ6IN97 320 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 RHBDD2Q6NTF9 364 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 UNC5DQ6UXZ4 953 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 COX15Q7KZN9 410 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 MRGPREQ86SM8 312 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 MCATQ8IVS2 390 aaKnown RBP16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 MAGOHBQ96A72 148 aaKnown RBP16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 MIPEPQ99797 713 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 MRM3Q9HC36 420 aaKnown RBP16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 SLC6A20Q9NP91 592 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 GNPTGQ9UJJ9 305 aa16.18■□□□□ 0.18
CROCCP3-203ENST00000589964 SHANK1Q9Y566 2161 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 LOC105369274A0A096LPK9 316 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 LOC102723532A0A0G2JNH3 316 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 ZCWPW2A0A1B0GU75 182 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 CEACAM4O75871 244 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 COILP38432 576 aaPredicted RBP16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 PGGT1BP53609 377 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 KLRB1Q12918 225 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 NKAIN1Q4KMZ8 207 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 AARS2Q5JTZ9 985 aaKnown RBP16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 KIAA0930Q6ICG6 404 aaPredicted RBP16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 FIGLAQ6QHK4 219 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 SHISA6Q6ZSJ9 500 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 PPP1R32Q7Z5V6 425 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 HOOK3Q86VS8 718 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 OR4N4Q8N0Y3 316 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 Q8NA96 180 aa16.17■□□□□ 0.18
CROCCP3-203ENST00000589964 SKA2Q8WVK7 121 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms